RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ATL1Q8WXF7 558 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 APBB2Q92870 758 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 SECISBP2LQ93073 1101 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 SPACA9Q96E40 222 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 CHFRQ96EP1 664 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 FER1L6-AS2Q96M78 137 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 NLRP4Q96MN2 994 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 DDOQ99489 341 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 FERMT1Q9BQL6 677 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 HAUS8Q9BT25 410 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 THUMPD3Q9BV44 507 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 MRIQ9BWK5 157 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ANKRD2Q9GZV1 360 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 RAD21L1Q9H4I0 556 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLITRK6Q9H5Y7 841 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 XAB2Q9HCS7 855 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 CNGB3Q9NQW8 809 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 HAO2Q9NYQ3 351 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLC9A2Q9UBY0 812 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 TMEM184BQ9Y519 407 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PCDHGA5Q9Y5G8 931 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ADGRL1O94910 1474 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 MYO5CQ9NQX4 1742 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 CD109Q6YHK3 1445 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 BRD4O60885 1362 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 CCDC188H7C350 402 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ADAM10O14672 748 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 STX6O43752 255 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZIC3O60481 467 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 TSPAN1O60635 241 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 TADA2AO75478 443 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ATP5BP06576 529 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 LINGO3P0C6S8 592 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 G6PDP11413 515 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MC5RP33032 325 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 EIF2S3P41091 472 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MMP13P45452 471 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 CCR10P46092 362 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 PTGR1Q14914 329 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 EZH2Q15910 746 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 CTF1Q16619 201 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 DECR1Q16698 335 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MEP1AQ16819 746 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 EIF2S3LQ2VIR3 472 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF284Q2VY69 593 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 SUPT20HL1Q3ZLR7 823 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 FSCBQ5H9T9 825 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MORN5Q5VZ52 161 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 TMEM211Q6ICI0 200 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 B3GNT6Q6ZMB0 384 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 DNAJB7Q7Z6W7 309 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MRPL10Q7Z7H8 261 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZC3HC1Q86WB0 502 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 CEP57Q86XR8 500 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 PI4KAP1Q8N8J0 262 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MIGA1Q8NAN2 632 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 CAMKVQ8NCB2 501 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 C16orf52Q8NHV5 167 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 TAAR8Q969N4 342 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ORAI1Q96D31 301 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ERLEC1Q96DZ1 483 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 APOLD1Q96LR9 279 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF830Q96NB3 372 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MS4A10Q96PG2 267 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MOV10L1Q9BXT6 1211 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 SCAND2PQ9GZW5 306 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 NOL11Q9H8H0 719 aaKnown RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 PANK3Q9H999 370 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 MMP25Q9NPA2 562 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 SQORQ9Y6N5 450 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 COL11A2P13942 1736 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 BCORL1Q5H9F3 1711 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ABCA9Q8IUA7 1624 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZFYVE16Q7Z3T8 1539 aa4.71□□□□□ -1.66
HMGB3P18-201ENST00000406327 DISP3Q9P2K9 1392 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 TMEM272A0A1B0GTI8 110 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLC16A5O15375 505 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 KCNN4O15554 427 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 HSPA12AO43301 675 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SYNCRIPO60506 623 aaKnown RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SOX30O94993 753 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 EPN2O95208 641 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 CYP19A1P11511 503 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 BDKRB2P30411 391 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 NUDT6P53370 316 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SPOCK1Q08629 439 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 HSPB3Q12988 150 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 LAMB3Q13751 1172 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 CTTNQ14247 550 aaKnown RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 MYBPC2Q14324 1141 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 PTPRCAPQ14761 206 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 Q4G0T1 1027 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 PXDC1Q5TGL8 231 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 PLA2G4FQ68DD2 849 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 DUS1LQ6P1R4 473 aaKnown RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 PAPD4Q6PIY7 484 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms