RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 IKZF5Q9H5V7 419 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 LHX3Q9UBR4 397 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 AURKCQ9UQB9 309 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 KIAA1549LQ6ZVL6 1849 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 A0A0J9YVX5 310 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 UBA6A0AVT1 1052 aaPredicted RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 SLC38A8A6NNN8 435 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 BTN3A1O00481 513 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 AREL1O15033 823 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 AXIN1O15169 862 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ACSL4O60488 711 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TPST1O60507 370 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TMCC1O94876 653 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 SNAP29O95721 258 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 PYGLP06737 847 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 SLC11A1P49279 550 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ADARP55265 1226 aaKnown RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 STX1BP61266 288 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ZXDBP98169 803 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 DUSP4Q13115 394 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 PMS2P3Q13401 168 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TGFBIQ15582 683 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 PTPRNQ16849 979 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 GLB1LQ6UWU2 654 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 GPR180Q86V85 440 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ZNF354CQ86Y25 554 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ERI1Q8IV48 349 aaKnown RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ZNF382Q96SR6 550 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 BPIFA1Q9NP55 256 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 LTB4R2Q9NPC1 389 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TAS2R13Q9NYV9 303 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 GFRA2O00451 464 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ANGPT2O15123 496 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 GREM1O60565 184 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ATE1O95260 518 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 HMGA1P17096 107 aaKnown RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 HOXB9P17482 250 aaPredicted RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 STT3AP46977 705 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 POLR2JP52435 117 aaKnown RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 ERVK-8P63133 956 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 PLOD1Q02809 727 aaPredicted RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 TRAF3Q13114 568 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 CDKN3Q16667 212 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 CHPFQ8IZ52 775 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 DTWD1Q8N5C7 304 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 B4GALNT2Q8NHY0 566 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 BIRC7Q96CA5 298 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 NAA50Q9GZZ1 169 aaKnown RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 PREBQ9HCU5 417 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TUBA8Q9NY65 449 aaPredicted RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 TMCO1Q9UM00 188 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 MAGED1Q9Y5V3 778 aaPredicted RBP9.73□□□□□ -0.85
MSH2-202ENST00000406134 ALPK3Q96L96 1907 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 COCHO43405 550 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 NBNO60934 754 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 BAIAP3O94812 1187 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 GPIP06744 558 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 CD247P20963 164 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 HTR1EP28566 365 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 MC4RP32245 332 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 SOX11P35716 441 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 TIGD2Q4W5G0 525 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ANKS6Q68DC2 871 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ITIH5Q86UX2 942 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 SGCDQ92629 289 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 LINGO1Q96FE5 620 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 HBEGFQ99075 208 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 RNF38Q9H0F5 515 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 CWH43Q9H720 699 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 CDH7Q9ULB5 785 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 OR51B4Q9Y5P0 310 aa9.73□□□□□ -0.85
MSH2-202ENST00000406134 ANKRD66B4E2M5 251 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 INHBBP09529 407 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 ELNP15502 786 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 SHMT2P34897 504 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 SCNN1BP51168 640 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 CDH4P55283 916 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 ADRM1Q16186 407 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 CRY1Q16526 586 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 ZXDCQ2QGD7 858 aaPredicted RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 ANKRD34AQ69YU3 496 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 DUS1LQ6P1R4 473 aaKnown RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 PRSS55Q6UWB4 352 aaPredicted RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 GABPB2Q8TAK5 448 aaPredicted RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 WFDC5Q8TCV5 224 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 PPWD1Q96BP3 646 aaKnown RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 SLC6A13Q9NSD5 602 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 ZIM2Q9NZV7 527 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 LTBP2Q14767 1821 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 DNAH14Q0VDD8 3507 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 OR6C75A6NL08 312 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 VPS4BO75351 444 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 SLC22A3O75751 556 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms