RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 AKR1B15C9JRZ8 316 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 H3BQ06 376 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 AHCYL1O43865 530 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 NDUFS7O75251 213 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 NDUFS3O75489 264 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 SURF6O75683 361 aaKnown RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CIAO1O76071 339 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 GABRB1P18505 474 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CDC25AP30304 524 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 SSTR2P30874 369 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 PIK3CAP42336 1068 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CLNS1AP54105 237 aaKnown RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 NUCB1Q02818 461 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 DDR1Q08345 913 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 PRKG2Q13237 762 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 IRF3Q14653 427 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CRYMQ14894 314 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CCDC57Q2TAC2 916 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 ASTE1Q2TB18 679 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CCDC152Q4G0S7 254 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 TDRD12Q587J7 1177 aaKnown RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 PRR5LQ6MZQ0 368 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 C9orf47Q6ZRZ4 202 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 SEPT14Q6ZU15 432 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 DPPA4Q7L190 304 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 FJX1Q86VR8 437 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 CNBD1Q8NA66 436 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 MIB2Q96AX9 1013 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 FAM120BQ96EK7 910 aaKnown RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 ACOX2Q99424 681 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLC25A33Q9BSK2 321 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 MMP25Q9NPA2 562 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 SETD4Q9NVD3 440 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 TINAGQ9UJW2 476 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 AGO1Q9UL18 857 aaKnown RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 PCDHA7Q9UN72 937 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 R3HDM2Q9Y2K5 976 aaKnown RBP4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 ABCC12Q96J65 1359 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 KIAA1551Q9HCM1 1747 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 CCDC88AQ3V6T2 1871 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SERPINI2O75830 405 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 MMP10P09238 476 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 ALOX12P18054 663 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 ACTN2P35609 894 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 IL15P40933 162 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 PRAMEP78395 509 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 CRYZQ08257 329 aaKnown RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 ZSCAN23Q3MJ62 389 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 CRY2Q49AN0 593 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 DUSP28Q4G0W2 176 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 FAM69BQ5VUD6 431 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 METTL2BQ6P1Q9 378 aaKnown RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 TMEM154Q6P9G4 183 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SARM1Q6SZW1 724 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 DLK2Q6UY11 383 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLC36A4Q6YBV0 504 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 TAOK1Q7L7X3 1001 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 ADGRF2Q8IZF7 708 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 DSELQ8IZU8 1212 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SRBD1Q8N5C6 995 aaKnown RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 HJURPQ8NCD3 748 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 B4GALNT2Q8NHY0 566 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 WASF1Q92558 559 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 NSUN4Q96CB9 384 aaKnown RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 METTL2AQ96IZ6 378 aaKnown RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 CSF3RQ99062 836 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SRSF8Q9BRL6 282 aaKnown RBP4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 PCGF1Q9BSM1 259 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 LRRCC1Q9C099 1032 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SMARCAD1Q9H4L7 1026 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 MTMR6Q9Y217 621 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 EXOC6BQ9Y2D4 811 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SESN1Q9Y6P5 492 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLX4Q8IY92 1834 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 ARFGEF1Q9Y6D6 1849 aa4.97□□□□□ -1.61
HMGB3P19-201ENST00000403971 MYO5AQ9Y4I1 1855 aaKnown RBP4.96□□□□□ -1.61
HMGB3P19-201ENST00000403971 HMGB1P1B2RPK0 211 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 SOCS6O14544 535 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 ATP2A1O14983 1001 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 HCRTR2O43614 444 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 OAZ2O95190 189 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 HOXC6P09630 235 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 STX2P32856 288 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 HTR6P50406 440 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 CUL4AQ13619 759 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 DHX34Q14147 1143 aaKnown RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 TOMM20Q15388 145 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 NAB2Q15742 525 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 GGNBP1Q5YKI7 109 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 SIGIRRQ6IA17 410 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 ATG9AQ7Z3C6 839 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 FBXL14Q8N1E6 418 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 C17orf53Q8N3J3 647 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 PGBD5Q8N414 524 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 RSRC1Q96IZ7 334 aaKnown RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 KXD1Q9BQD3 176 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 SPRY4Q9C004 299 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 SEBOXQ9HB31 216 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms