RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 CALCAP01258 141 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 RPLP0P05388 317 aaKnown RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 ALPIP09923 528 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CTSEP14091 401 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 XPAP23025 273 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 USP8P40818 1118 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 GPR3P46089 330 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 SERPINH1P50454 418 aaKnown RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CCNHP51946 323 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 PNOCQ13519 176 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 C1orf61Q13536 156 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 EIF4EBP2Q13542 120 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 POLD3Q15054 466 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 C5orf22Q49AR2 442 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CARD16Q5EG05 197 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 LVRNQ6Q4G3 990 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 MACC1Q6ZN28 852 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 TFAP2DQ7Z6R9 452 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 VPS36Q86VN1 386 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 ZDHHC17Q8IUH5 632 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 SLC35F3Q8IY50 421 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CBARPQ8N350 705 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 OR6C4Q8NGE1 309 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CXorf40AQ8TE69 158 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 ZNF606Q8WXB4 792 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 EXTL1Q92935 676 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 GFM2Q969S9 779 aaKnown RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 PRR11Q96HE9 360 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 DHTKD1Q96HY7 919 aaPredicted RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 PSMB7Q99436 277 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CMKLR1Q99788 373 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 INTS2Q9H0H0 1204 aaKnown RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 TKTL2Q9H0I9 626 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 ZDHHC6Q9H6R6 413 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 WDCPQ9H6R7 721 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 STARD5Q9NSY2 213 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 DDX56Q9NY93 547 aaKnown RBP6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 HECTD1Q9ULT8 2610 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CNTN6Q9UQ52 1028 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 LOXL2Q9Y4K0 774 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 CFAP46Q8IYW2 2715 aa6.8□□□□□ -1.32
CEACAM1-208ENST00000403461 NUMA1Q14980 2115 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 A0A0A6YYK5 440 aaPredicted RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 A0A0D9SEW6 157 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 A0A1W2PNU3 283 aaPredicted RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 ILVBLA1L0T0 632 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 TRIM49BA6NDI0 452 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 CYSRT1A8MQ03 144 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 TMEM110-MUSTN1A8MSY1 372 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 D6RAR5 112 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 NTN3O00634 580 aaPredicted RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 YY2O15391 372 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SUV39H1O43463 412 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SMAD6O43541 496 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 NRP2O60462 931 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 H2AFYO75367 372 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 CNTN5O94779 1100 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 FGFR1OPO95684 399 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 AFPP02771 609 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 LPLP06858 475 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 KRT10P13645 584 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 CD82P27701 267 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 CCKBRP32239 447 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 UGT1A5P35504 534 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 KRT9P35527 623 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SULT1E1P49888 294 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 PDX1P52945 283 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 RRADP55042 308 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 PFN3P60673 137 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SNRPD1P62314 119 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 PITX1P78337 314 aaPredicted RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 DEUP1Q05D60 604 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 RAD51Q06609 339 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 EIF2B5Q13144 721 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 PKP1Q13835 747 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 TRIM25Q14258 630 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 FGL2Q14314 439 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 DRAP1Q14919 205 aaPredicted RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 TAF5Q15542 800 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 ALFQ53S48 1182 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 ZNF805Q5CZA5 627 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 COLEC12Q5KU26 742 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 ARHGEF19Q8IW93 802 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 RBFAQ8N0V3 343 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SDR16C5Q8N3Y7 309 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 EXD3Q8N9H8 876 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 MSANTD4Q8NCY6 345 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 C1orf131Q8NDD1 294 aaKnown RBP6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 OR52K2Q8NGK3 314 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 PPP1R14CQ8TAE6 165 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 RELTQ969Z4 430 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 C1orf74Q96LT6 269 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 CPXM1Q96SM3 734 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SEMA3CQ99985 751 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 SOX7Q9BT81 388 aa6.79□□□□□ -1.32
CEACAM1-208ENST00000403461 LRRC61Q9BV99 259 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms