RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 CDX4O14627 284 aaPredicted RBP15.72■□□□□ 0.11
HMGA1-204ENST00000401473 GRID2O43424 1007 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 NDUFS3O75489 264 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 SYPP08247 313 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 OGNP20774 298 aaKnown RBP15.72■□□□□ 0.11
HMGA1-204ENST00000401473 PLA2G5P39877 138 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 GNPDA1P46926 289 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 RXRGP48443 463 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 ITIH4Q14624 930 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF423Q2M1K9 1284 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 KBTBD12Q3ZCT8 623 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 AARS2Q5JTZ9 985 aaKnown RBP15.72■□□□□ 0.11
HMGA1-204ENST00000401473 CNSTQ6PJW8 725 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 PACS1Q6VY07 963 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 LMNTD2Q8IXW0 634 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 PHACTR4Q8IZ21 702 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 UHMK1Q8TAS1 419 aaKnown RBP15.72■□□□□ 0.11
HMGA1-204ENST00000401473 DCUN1D1Q96GG9 259 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 GTPBP2Q9BX10 602 aaKnown RBP15.72■□□□□ 0.11
HMGA1-204ENST00000401473 ZDHHC5Q9C0B5 715 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 P2RY12Q9H244 342 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 PCNX2A6NKB5 2137 aa15.72■□□□□ 0.11
HMGA1-204ENST00000401473 IQCF5A8MTL0 148 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 RIPK2O43353 540 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 SDC3O75056 442 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 TNFP01375 233 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 CELA2BP08218 269 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 LEPRP48357 1165 aaKnown RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 IL9RQ01113 521 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 C1orf61Q13536 156 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 CRTC3Q6UUV7 619 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 TRMT10CQ7L0Y3 403 aaKnown RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 CHST15Q7LFX5 561 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 TRAPPC5Q8IUR0 188 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 FAM122AQ96E09 287 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 TTC1Q99614 292 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 FAM167BQ9BTA0 163 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 CLPBQ9H078 707 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 UCKL1Q9NWZ5 548 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 ZFATQ9P243 1243 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 GPR34Q9UPC5 381 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 GPSM3Q9Y4H4 160 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 CNOT1A5YKK6 2376 aaKnown RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 A0A1B0GTQ1 180 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 GPR89AB7ZAQ6 455 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 PRMT5O14744 637 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 SPAG6O75602 509 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 RASGRP1O95267 797 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 GPR89BP0CG08 455 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 RALBP11234 206 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF7P17097 686 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 PPARGP37231 505 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 ABCG1P45844 678 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 SLC29A2Q14542 456 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 EFTUD2Q15029 972 aaKnown RBP eCLIP15.71■□□□□ 0.114e-21■■■■■ 30.7
HMGA1-204ENST00000401473 PRRT3Q5FWE3 981 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF549Q6P9A3 640 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF449Q6P9G9 518 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 NRROSQ86YC3 692 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 SPNS2Q8IVW8 549 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 KIAA2013Q8IYS2 634 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 SLC25A45Q8N413 288 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 MINDY1Q8N5J2 469 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 HEXDCQ8WVB3 486 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 MCMBPQ9BTE3 642 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 LRRC61Q9BV99 259 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 RMI1Q9H9A7 625 aa15.71■□□□□ 0.11
HMGA1-204ENST00000401473 APOBEC3BQ9UH17 382 aaKnown RBP15.71■□□□□ 0.11
HMGA1-204ENST00000401473 UBA6A0AVT1 1052 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-204ENST00000401473 CFAP99D6REC4 459 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 DGKAP23743 735 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 MCM3P25205 808 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 AK4P27144 223 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-204ENST00000401473 FMO4P31512 558 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 BLKP51451 505 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 ADARP55265 1226 aaKnown RBP15.7■□□□□ 0.1
HMGA1-204ENST00000401473 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.16e-30■□□□□ 9.8
HMGA1-204ENST00000401473 CTBSQ01459 385 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 UAP1Q16222 522 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-204ENST00000401473 CTSL3PQ5NE16 218 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 IL27RAQ6UWB1 636 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 LRRTM4Q86VH4 590 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 GALNT13Q8IUC8 556 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 MYRIPQ8NFW9 859 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 SLC13A1Q9BZW2 595 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 ZCCHC2Q9C0B9 1178 aaKnown RBP15.7■□□□□ 0.1
HMGA1-204ENST00000401473 INTS10Q9NVR2 710 aaKnown RBP15.7■□□□□ 0.1
HMGA1-204ENST00000401473 SPTBN4Q9H254 2564 aa15.7■□□□□ 0.1
HMGA1-204ENST00000401473 POP7O75817 140 aaKnown RBP15.69■□□□□ 0.1
HMGA1-204ENST00000401473 PIAS2O75928 621 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 FAM155BO75949 473 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 TUBBP07437 444 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 STX2P32856 288 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 ARRB1P49407 418 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-204ENST00000401473 PRLHRP49683 370 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 EIF3BP55884 814 aaKnown RBP15.69■□□□□ 0.1
HMGA1-204ENST00000401473 PLA2G4EQ3MJ16 856 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 XKR5Q6UX68 686 aa15.69■□□□□ 0.1
HMGA1-204ENST00000401473 KIAA0408Q6ZU52 694 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms