RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 FGF10O15520 208 aaPredicted RBP13.74□□□□□ -0.21
RERE-204ENST00000400908 TRBC1P01850 177 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 SNRPD1P62314 119 aaKnown RBP13.74□□□□□ -0.21
RERE-204ENST00000400908 GCNT6Q5T4J0 391 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 ADGRG6Q86SQ4 1221 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 NPAS2Q99743 824 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 CIB1Q99828 191 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 CXorf21Q9HAI6 301 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 KANSL3Q9P2N6 904 aa13.74□□□□□ -0.21
RERE-204ENST00000400908 TRIM64BA6NI03 449 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.214e-15■□□□□ 8.8
RERE-204ENST00000400908 TBX1O43435 398 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 NDST1P52848 882 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 HSD17B12Q53GQ0 312 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 FOXRED2Q8IWF2 684 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 HELQQ8TDG4 1101 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 FERD3LQ96RJ6 166 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 TMEM184CQ9NVA4 438 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 COMMD3Q9UBI1 195 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 A0A0A0MRY4 1105 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 CAPN8A6NHC0 703 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SNAPC5O75971 98 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 CELF2O95319 508 aaKnown RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 IFNW1P05000 195 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 PSMB4P28070 264 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 GABRB2P47870 512 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SLC6A3Q01959 620 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 COLEC12Q5KU26 742 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 C6orf52Q5T4I8 152 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 GARNL3Q5VVW2 1013 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 UBE2R2Q712K3 238 aaPredicted RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 C4orf19Q8IY42 314 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 OR2AJ1Q8NGZ0 328 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 PRICKLE1Q96MT3 831 aaPredicted RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 SPATA13Q96N96 652 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 TCF25Q9BQ70 676 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 TKTL2Q9H0I9 626 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 PARP4Q9UKK3 1724 aaKnown RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 PAQR7Q86WK9 346 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 KAT2AQ92830 837 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 ZNF649Q9BS31 505 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 EQTNQ9NQ60 294 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 FBXL21Q9UKT6 434 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 A0A0J9YYE9 177 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SLC2A2P11168 524 aaPredicted RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 AQP1P29972 269 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 ALDH4A1P30038 563 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 CD86P42081 329 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SSR2P43308 183 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 XYLBO75191 536 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 CSN2P05814 226 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 RPS9P46781 194 aaKnown RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 SLC5A3P53794 718 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SLC20A2Q08357 652 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 CDK10Q15131 360 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 GFOD2Q3B7J2 385 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
RERE-204ENST00000400908 OTOP1Q7RTM1 612 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 TEX19Q8NA77 164 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 KLHL15Q96M94 604 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 MTMR9Q96QG7 549 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 B3GNT4Q9C0J1 378 aa13.73□□□□□ -0.21
RERE-204ENST00000400908 SLITRK3O94933 977 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 SLC35G4P0C7Q5 338 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 PRKCHP24723 683 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 EML3Q32P44 896 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 GRIN3AQ8TCU5 1115 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 FCGR1BQ92637 280 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 CNDP2Q96KP4 475 aaKnown RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 DNAJC18Q9H819 358 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 CNOT6Q9ULM6 557 aaKnown RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 NR2E1Q9Y466 385 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 PCDHGB1Q9Y5G3 927 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ZMYM2Q9UBW7 1377 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 TLX3O43711 291 aaPredicted RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 MATN4O95460 622 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 VTNP04004 478 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ZNF20P17024 532 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 KLRC2P26717 231 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 PITRM1Q5JRX3 1037 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 OR10H4Q8NGA5 316 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 PNPT1Q8TCS8 783 aaKnown RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 C15orf40Q8WUR7 153 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 SEC14L1Q92503 715 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 SLC7A6OSQ96CW6 309 aaPredicted RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 CD247P20963 164 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms