RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 MAPRE3Q9UPY8 281 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 NID2Q14112 1375 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 C15orf38-AP3S2A0A0A6YYH1 394 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CHRNA1P02708 482 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CSN2P05814 226 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TKTP29401 623 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 UGT2B15P54855 530 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 RAB25P57735 213 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 MYBPC3Q14896 1274 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PTPRNQ16849 979 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 EMC10Q5UCC4 262 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SV2AQ7L0J3 742 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TSEN2Q8NCE0 465 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 GIPC3Q8TF64 312 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TMEM68Q96MH6 324 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 FAM234BA2RU67 622 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PSME3P61289 254 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CHST4Q8NCG5 386 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CYP2W1Q8TAV3 490 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 MAPK15Q8TD08 544 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 LINGO1Q96FE5 620 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 REEP1Q9H902 201 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 RNPEPL1Q9HAU8 725 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PHTF1Q9UMS5 762 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ANKRD6Q9Y2G4 727 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 DNMT3AQ9Y6K1 912 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ENPP3O14638 875 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CLDN11O75508 207 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PROSCO94903 275 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PURAQ00577 322 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TLR1Q15399 786 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CCL14Q16627 93 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ERICH5Q6P6B1 374 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 BNC2Q6ZN30 1099 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CIR1Q86X95 450 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ABRAQ8N0Z2 381 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SAMD11Q96NU1 681 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PORCNQ9H237 461 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SMURF1Q9HCE7 757 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 KCNK4Q9NYG8 393 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 MED31Q9Y3C7 131 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 NWD1Q149M9 1564 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ARHGEF33A8MVX0 844 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 MAN2B1O00754 1011 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 GNB5O14775 395 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SERPINB7O75635 380 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PSMB4P28070 264 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PBX3P40426 434 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 FASTKQ14296 549 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC9B2Q86UD5 537 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ARMC10Q8N2F6 343 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 EPS8L3Q8TE67 593 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 DENND1AQ8TEH3 1009 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TRIM43Q96BQ3 446 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PTCD3Q96EY7 689 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 WDR26Q9H7D7 661 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 METTL8Q9H825 291 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PNPLA8Q9NP80 782 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SLCO1B7G3V0H7 640 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 H3BSH0 61 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 BMP6P22004 513 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 LARS2Q15031 903 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TBCELQ5QJ74 424 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC26A11Q86WA9 606 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ACTL9Q8TC94 416 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TMEM109Q9BVC6 243 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CHIAQ9BZP6 476 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 PREX1Q8TCU6 1659 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 OR10H3O60404 316 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 AKAP3O75969 853 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 UBOX5O94941 541 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 HGFP14210 728 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 SMPD1P17405 629 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 OLR1P78380 273 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 SPIBQ01892 262 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 CBLBQ13191 982 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 AADACL4Q5VUY2 407 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF776Q68DI1 518 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 TMEM220Q6QAJ8 160 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 UNC93AQ86WB7 457 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 WFIKKN2Q8TEU8 576 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 EFHD2Q96C19 240 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 ACP5P13686 325 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 RAB4AP20338 218 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 CD40LGP29965 261 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 ARCN1P48444 511 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 RARRES1P49788 294 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 RPL38P63173 70 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 PCDH1Q08174 1060 aa10.86□□□□□ -0.67
CACNA1C-216ENST00000399638 CPSF6Q16630 551 aaKnown RBP eCLIP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms