RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 G3V2T6 193 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 NDUFS2O75306 463 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DEAF1O75398 565 aaPredicted RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 SEC24AO95486 1093 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 HSD17B1P14061 328 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 WNT3AP56704 352 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 CHRNB3Q05901 458 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 KCNAB2Q13303 367 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DAG1Q14118 895 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 C6orf141Q5SZD1 244 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 SPRYD7Q5W111 196 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DCAF15Q66K64 600 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DENND5AQ6IQ26 1287 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 RAB44Q7Z6P3 723 aaPredicted RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 RBM23Q86U06 439 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 MINDY1Q8N5J2 469 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 FNDC5Q8NAU1 212 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 AFG1LQ8WV93 481 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 NODALQ96S42 347 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DUSP16Q9BY84 665 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 GLOD4Q9HC38 313 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 TLR9Q9NR96 1032 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 COMMD10Q9Y6G5 202 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 MSI1O43347 362 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CST1P01037 141 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 HLA-DQB2P05538 268 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 HTR1AP08908 422 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 RHOQP17081 205 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 HRH2P25021 359 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 AGTR2P50052 363 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 GRSF1Q12849 480 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 RBBP7Q16576 425 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 DPY19L1Q2PZI1 675 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CATSPEREQ5SY80 951 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 GTF2IRD2BQ6EKJ0 949 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 C8orf82Q6P1X6 216 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ENPP6Q6UWR7 440 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CLEC20AQ6ZU45 233 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 BNIPLQ7Z465 357 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 GTF2IRD2Q86UP8 949 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ANKRD13BQ86YJ7 626 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC22A9Q8IVM8 553 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SCML4Q8N228 414 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CHST13Q8NET6 341 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 BLOC1S5Q8TDH9 187 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 MYOCQ99972 504 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SPATC1LQ9H0A9 340 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SLCO3A1Q9UIG8 710 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 FBXW11Q9UKB1 542 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 PCDHA9Q9Y5H5 950 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 COL2A1P02458 1487 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 NCAM2O15394 837 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CPNE6O95741 557 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 FADS2O95864 444 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TGFB3P10600 412 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CCR1P32246 355 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 RPS3AP61247 264 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 OR4D1Q15615 310 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 DEPDC1Q5TB30 811 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 PRMT9Q6P2P2 845 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TXNDC11Q6PKC3 985 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 FRA10AC1Q70Z53 315 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 PLPPR4Q7Z2D5 763 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 MILR1Q7Z6M3 343 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SYTL1Q8IYJ3 562 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 DTWD1Q8N5C7 304 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CDYL2Q8N8U2 506 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 C17orf50Q8WW18 174 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.78□□□□□ -0.848e-7■■■■■ 48.3
PTCHD4-202ENST00000398738 TNIP3Q96KP6 325 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TBATAQ96M53 351 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 C6orf62Q9GZU0 229 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 NTN4Q9HB63 628 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 FOXD3Q9UJU5 478 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 LRRC37AA6NMS7 1700 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 MYBPHLA2RUH7 354 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 IQCA1LA6NCM1 817 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 A8MV72 311 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 MTSS1O43312 755 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 MITFO75030 526 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 GJB3O75712 270 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ANXA9O76027 345 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 KRT75O95678 551 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TIMP2P16035 220 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 GTF2E2P29084 291 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CD86P42081 329 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 HERVK_113P63132 956 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SYT16Q17RD7 645 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ADPRMQ3LIE5 342 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 COLEC12Q5KU26 742 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ARMCX2Q7L311 632 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 CCDC103Q8IW40 242 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 RORBQ92753 470 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ERVK-6Q9BXR3 956 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 AMBRA1Q9C0C7 1298 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms