RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CCR1P32246 355 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 CRYBB1P53674 252 aaPredicted RBP15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 IHHQ14623 411 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 PTPRCAPQ14761 206 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 FUT11Q495W5 492 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 RABL3Q5HYI8 236 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 PRMT9Q6P2P2 845 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 SLCO6A1Q86UG4 719 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 MINDY1Q8N5J2 469 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 GABPB2Q8TAK5 448 aaPredicted RBP15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 HASPINQ8TF76 798 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 VPS33AQ96AX1 596 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 FKBP10Q96AY3 582 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 PABPC5Q96DU9 382 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 BTN2A3PQ96KV6 586 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 MYRFLQ96LU7 910 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 PPP1R2P1Q96PQ5 205 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 TUBB1Q9H4B7 451 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 ACTR3BQ9P1U1 418 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 A0A1B0GTL3 188 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 TBKBP1A7MCY6 615 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 J3KR12 359 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 DYRK3O43781 588 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 UGT2B11O75310 529 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 WISP3O95389 354 aaPredicted RBP15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 IGHA2P01877 340 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 THP07101 528 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 HSD17B1P14061 328 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 CD1DP15813 335 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 CES1P23141 567 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 HOXC13P31276 330 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 CASP2P42575 452 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 SCNN1GP51170 649 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 ECT2LQ008S8 904 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 BNIP2Q12982 314 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 OR4D1Q15615 310 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 PHYKPLQ8IUZ5 450 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 RTL3Q8N8U3 475 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 FUNDC2Q9BWH2 189 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 RRAGCQ9HB90 399 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 FBXO8Q9NRD0 319 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 WARS2Q9UGM6 360 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 TESMINQ9Y4I5 508 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 ANGPTL3Q9Y5C1 460 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 LOC105371267A0A1B0GV96 52 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 SNPHO15079 494 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 GFAPP14136 432 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 DIO3P55073 304 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 SLC10A7Q0GE19 358 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 PLCL1Q15111 1095 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 ARTNQ5T4W7 220 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 RFPL4BQ6ZWI9 263 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 SIX5Q8N196 739 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 SPERTQ8NA61 448 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 GOLM1Q8NBJ4 401 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 MAGEE2Q8TD90 523 aaPredicted RBP15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 TBATAQ96M53 351 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 OR2B2Q9GZK3 357 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 POLG2Q9UHN1 485 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 Q9Y3F1 56 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 HS3ST4Q9Y661 456 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 MIA3Q5JRA6 1907 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 HOXC11O43248 304 aaPredicted RBP15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 RPS9P46781 194 aaKnown RBP15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 GSK3BP49841 420 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 HUNKP57058 714 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 PHC1P78364 1004 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 ADARB1P78563 741 aaKnown RBP15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 NFYCQ13952 458 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 BRMS1LQ5PSV4 323 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 ZNF549Q6P9A3 640 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 LACC1Q8IV20 430 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 PIK3C3Q8NEB9 887 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 TRPV3Q8NET8 790 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 NACC2Q96BF6 587 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 IMP4Q96G21 291 aaKnown RBP15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 MFSD1Q9H3U5 465 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 PIF1Q9H611 641 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 USP22Q9UPT9 525 aa15.82■□□□□ 0.12
CHMP1A-201ENST00000397901 C17orf102A2RUQ5 167 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 H0YAE9 185 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 SLC7A4O43246 635 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 LBPP18428 481 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 BRCC3P46736 316 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 CLCQ05315 142 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 ILF2Q12905 390 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 EIF4EBP2Q13542 120 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 CBX2Q14781 532 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 TAF1CQ15572 869 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 TMC5Q6UXY8 1006 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 SLC16A12Q6ZSM3 486 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 RAB44Q7Z6P3 723 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 LRRTM3Q86VH5 581 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 SCML4Q8N228 414 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 TP53INP1Q96A56 240 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 HMCESQ96FZ2 354 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 CLSTN3Q9BQT9 956 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 AP5M1Q9H0R1 490 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 ARNT2Q9HBZ2 717 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms