RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 NSMCE2Q96MF7 247 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 NSMCE3Q96MG7 304 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 TSSK3Q96PN8 268 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 C2orf49Q9BVC5 232 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 OAZ3Q9UMX2 235 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 LRRC37A2A6NM11 1700 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ILVBLA1L0T0 632 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 LCHNA4D1U4 455 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 CLOCKO15516 846 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ITPKAP23677 461 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 PAX3P23760 479 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ESRRGP62508 458 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 YBX1P67809 324 aaKnown RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 PRKG2Q13237 762 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 PTGR1Q14914 329 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 CRY1Q16526 586 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 GCNT7Q6ZNI0 430 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF461Q8TAF7 563 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 FAM162AQ96A26 154 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ATOH8Q96SQ7 321 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 CDK5RAP1Q96SZ6 601 aaKnown RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 MRPL17Q9NRX2 175 aaKnown RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 AXIN1O15169 862 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 MLYCDO95822 493 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 GRIA2P42262 883 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 GSK3BP49841 420 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ARF5P84085 180 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 CHRNA6Q15825 494 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR4F6Q8NGB9 312 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HMGCLL1Q8TB92 370 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF558Q96NG5 402 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 TRAPPC9Q96Q05 1148 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 MGME1Q9BQP7 344 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 FEM1AQ9BSK4 669 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 DPY30Q9C005 99 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 H3BSA7 217 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ARPC2O15144 300 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HIST1H2AGP0C0S8 130 aaPredicted RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HIST1H2ADP20671 130 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 OXTRP30559 389 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HALP42357 657 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 RPL5P46777 297 aaKnown RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 TM4SF4P48230 202 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 RING1Q06587 406 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 GTF2H2Q13888 395 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 CCSAPQ6IQ19 270 aaPredicted RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 GTF2H2CQ6P1K8 395 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 CHSY3Q70JA7 882 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HIST1H2AHQ96KK5 128 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ASB2Q96Q27 587 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HIST1H2AJQ99878 128 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 SH3GL3Q99963 347 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 CLSTN3Q9BQT9 956 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 H2AFJQ9BTM1 129 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 BBS2Q9BXC9 721 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 FAM126AQ9BYI3 521 aaPredicted RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ABCB8Q9NUT2 735 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 INTS10Q9NVR2 710 aaKnown RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 RIMS3Q9UJD0 308 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 SQORQ9Y6N5 450 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 TET1Q8NFU7 2136 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 IGLV3-10A0A075B6K4 115 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 MYO1GB0I1T2 1018 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 CCL16O15467 120 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 FFAR2O15552 330 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 EPOP01588 193 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HSPA1AP0DMV8 641 aaKnown RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 HSPA1BP0DMV9 641 aaKnown RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 UROSP10746 265 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 GPX3P22352 226 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 GTF2H3Q13889 308 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ADGRG6Q86SQ4 1221 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF683Q8IZ20 524 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 FIBCD1Q8N539 461 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 TEX26Q8N6G2 289 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 BTBD9Q96Q07 612 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 MCMBPQ9BTE3 642 aa10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 FARSBQ9NSD9 589 aaKnown RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 WARS2Q9UGM6 360 aaKnown RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 LEF1Q9UJU2 399 aaPredicted RBP10.31□□□□□ -0.76
CPSF1P1-201ENST00000397477 CEP290O15078 2479 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 GLYATL1P3A0A0U1RQE8 302 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 C7orf72A4D263 438 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR2AG2A6NM03 316 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 NEDD8-MDP1E9PL57 170 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 SOCS2O14508 198 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 EI24O14681 340 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 INPPL1O15357 1258 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 AHCYL1O43865 530 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 ULK1O75385 1050 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 VNN2O95498 520 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 PRLP01236 227 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 GSSP48637 474 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 ERVPABLB-1P60509 514 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 PRKCQQ04759 706 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 CBLBQ13191 982 aa10.3□□□□□ -0.76
CPSF1P1-201ENST00000397477 TMED1Q13445 227 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms