RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PFDN5Q99471 154 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 LYARQ9NX58 379 aaKnown RBP13.18□□□□□ -0.3
HIPK3-202ENST00000379016 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
HIPK3-202ENST00000379016 CLCA1A8K7I4 914 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 CSF2P04141 144 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 CXCR3P49682 368 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 MSANTD2Q6P1R3 559 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 CD302Q8IX05 232 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 CFAP206Q8IYR0 622 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 WRAP53Q9BUR4 548 aaKnown RBP13.18□□□□□ -0.3
HIPK3-202ENST00000379016 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 MEAF6Q9HAF1 191 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 EDARQ9UNE0 448 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 INSRP06213 1382 aa13.18□□□□□ -0.3
HIPK3-202ENST00000379016 TRBC1P01850 177 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 IRF2P14316 349 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 PON1P27169 355 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 AVPR1BP47901 424 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 TTPAP49638 278 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 DCDC1P59894 354 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 PDK3Q15120 406 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 UBE2UQ5VVX9 321 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ARHGAP12Q8IWW6 846 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 DPPA5A6NC42 116 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 CABYRO75952 493 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 LCKP06239 509 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 CD247P20963 164 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 MLC1Q15049 377 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 GMEB2Q9UKD1 530 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 SLC27A5Q9Y2P5 690 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ATP6AP2A0A1C7CYW4 349 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF705EA8MWA4 302 aaPredicted RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ATP6AP2O75787 350 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 LTA4HP09960 611 aaKnown RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 OLR1P78380 273 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 FSCN1Q16658 493 aaKnown RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ZSCAN1Q8NBB4 408 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 NSMCE3Q96MG7 304 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 MND1Q9BWT6 205 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 EIF5A2Q9GZV4 153 aaKnown RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 XPNPEP3Q9NQH7 507 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 PLD2O14939 933 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 PSMB4P28070 264 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 RPL14P50914 215 aaKnown RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 NAGLUP54802 743 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 FAM83HQ6ZRV2 1179 aaPredicted RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 SPATC1Q76KD6 591 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 OR7G1Q8NGA0 311 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 MFSD14AQ96MC6 490 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ITGB1BP2Q9UKP3 347 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 IGFBP1P08833 259 aaPredicted RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 GRIA4P48058 902 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 MIPEPQ99797 713 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 NUDT15Q9NV35 164 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF490Q9ULM2 529 aaPredicted RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 A8MUI8 341 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 C2orf74A8MZ97 194 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 MFSD11O43934 449 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 CNOT4O95628 575 aaKnown RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 MSX2P35548 267 aaPredicted RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
HIPK3-202ENST00000379016 DCST1Q5T197 706 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 CCDC107Q8WV48 283 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 AP4B1Q9Y6B7 739 aa13.17□□□□□ -0.3
HIPK3-202ENST00000379016 A8MVJ9 347 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 CCRL2O00421 344 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 CYP1A2P05177 515 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 SLC25A3Q00325 362 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 TRAPPC6BQ86SZ2 158 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 MAB21L3Q8N8X9 362 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 TMBIM4Q9HC24 238 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 COMMD3Q9UBI1 195 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 COMMD3-BMI1R4GMX3 469 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 TCOF1Q13428 1488 aaKnown RBP13.16□□□□□ -0.3
HIPK3-202ENST00000379016 ACTL6BO94805 426 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 UBXN7O94888 489 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 FNTBP49356 437 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
HIPK3-202ENST00000379016 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 UBXN2BQ14CS0 331 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
HIPK3-202ENST00000379016 GPR152Q8TDT2 470 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms