RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 OR4D1Q15615 310 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 PFKFB4Q16877 469 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 LRRC26Q2I0M4 334 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 GAREM2Q75VX8 874 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 TMCO2Q7Z6W1 182 aaPredicted RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 TMC8Q8IU68 726 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 PNPLA1Q8N8W4 532 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 KREMEN2Q8NCW0 462 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 DTX3LQ8TDB6 740 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 OSCP1Q8WVF1 389 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 BIRC8Q96P09 236 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 S100A14Q9HCY8 104 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 IL23AQ9NPF7 189 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 RBMX2Q9Y388 322 aaKnown RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 NOX1Q9Y5S8 564 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 H3BMM5 538 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 PRMT5O14744 637 aaPredicted RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 AZIN1O14977 448 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 JUNP05412 331 aaKnown RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 CHRM3P20309 590 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 SERPINA4P29622 427 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 RXRGP48443 463 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 SNRPD1P62314 119 aaKnown RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 ADRM1Q16186 407 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 GEN1Q17RS7 908 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 FAM209AQ5JX71 171 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 PSAPL1Q6NUJ1 521 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 PIH1D2Q8WWB5 315 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 PDLIM5Q96HC4 596 aaKnown RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 PAWRQ96IZ0 340 aaKnown RBP8.13□□□□□ -1.11
UBR4-202ENST00000375224 COX4I2Q96KJ9 171 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 C1QTNF3Q9BXJ4 246 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 LRRC3Q9BY71 257 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 BPIFA1Q9NP55 256 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 TBC1D23Q9NUY8 699 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 POMPQ9Y244 141 aa8.13□□□□□ -1.11
UBR4-202ENST00000375224 FAM47E-STBD1D6RA91 191 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 PSMD12O00232 456 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 GIPC1O14908 333 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 HTRA2O43464 458 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 SNX2O60749 519 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CRCPO75575 148 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 MLYCDO95822 493 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 PRSS56P0CW18 603 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 MTHFD2P13995 350 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ITGALP20701 1170 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ENPP1P22413 925 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 RPS3P23396 243 aaKnown RBP eCLIP8.12□□□□□ -1.118e-8■■■□□ 16.4
UBR4-202ENST00000375224 RAB15P59190 212 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 XIAPP98170 497 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 RALGDSQ12967 914 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 LCP2Q13094 533 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 COL19A1Q14993 1142 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ATXN7L2Q5T6C5 722 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 TMEM198Q66K66 360 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 PIANPQ8IYJ0 282 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 APCDD1Q8J025 514 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ISG20Q96AZ6 181 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 RCN3Q96D15 328 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 C19orf60Q96EN9 201 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ZBED2Q9BTP6 218 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SLC25A23Q9BV35 468 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 MID1IP1Q9NPA3 183 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 HTTP42858 3142 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 A0A0J9YYE9 177 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 A0A1W2PQ67 120 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 LEFTY2O00292 366 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 BTN3A1O00481 513 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 KLK8O60259 260 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CLASP2O75122 1294 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 CHEK2O96017 543 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 GLUD1P00367 558 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 TRBC1P01850 177 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ENO2P09104 434 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 OCM2P0CE71 109 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 OCMP0CE72 109 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 CDK4P11802 303 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CLCQ05315 142 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 LMAN2Q12907 356 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 FASTKQ14296 549 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 MMEL1Q495T6 779 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 NECAB2Q7Z6G3 386 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 BBS7Q8IWZ6 715 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 WFDC5Q8TCV5 224 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 TRPC4APQ8TEL6 797 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 TRIM43Q96BQ3 446 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 NUSAP1Q9BXS6 441 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 CLPBQ9H078 707 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 WDR41Q9HAD4 459 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 EVLQ9UI08 416 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 MED16Q9Y2X0 877 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 INSL6Q9Y581 213 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ZBBXA8MT70 800 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 UBFD1O14562 309 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 CNOT3O75175 753 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 ECI2O75521 394 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms