RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 CXCL17Q6UXB2 119 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 COMMD2Q86X83 199 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 HSPBAP1Q96EW2 488 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.98■□□□□ 0.313e-10■■■□□ 19.2
PTP4A1-201ENST00000370651 SGK2Q9HBY8 427 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 hCG_2039718K7EN88 272 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC22A1O15245 554 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 TPD52L2O43399 206 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 GOT2P00505 430 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 TLX1P31314 330 aaPredicted RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 MANFP55145 182 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 GAD2Q05329 585 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 BIKQ13323 160 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 RD3Q7Z3Z2 195 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 TRPV1Q8NER1 839 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 OR5K1Q8NHB7 308 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 CSGALNACT1Q8TDX6 532 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 FCGR1BQ92637 280 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 TMCO6Q96DC7 493 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 VMP1Q96GC9 406 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 COPS4Q9BT78 406 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 ZFYVE1Q9HBF4 777 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 INTS7Q9NVH2 962 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 POLR1DQ9Y2S0 133 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 ARHGEF33A8MVX0 844 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 RPLP0P05388 317 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 CFHP08603 1231 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 RELL1Q8IUW5 271 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 DLDP09622 509 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 TIE1P35590 1138 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 RHAGQ02094 409 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 MPP2Q14168 576 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 RBM48Q5RL73 367 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 VANGL1Q8TAA9 524 aaPredicted RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 SKA1Q96BD8 255 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 PDCD10Q9BUL8 212 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 NKIRAS2Q9NYR9 191 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 RAI2Q9Y5P3 530 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 EFCAB9A8MZ26 197 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 TYROBPO43914 113 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 YAP1P46937 504 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 STARP49675 285 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 EEFSECP57772 596 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 LIX1Q8N485 282 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 C11orf24Q96F05 449 aaPredicted RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 FAM234BA2RU67 622 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 CLDN11O75508 207 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 OR5F1O95221 314 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 NUDT14O95848 222 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 SMAD3P84022 425 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 FAM174BQ3ZCQ3 159 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 TNFAIP8L3Q5GJ75 292 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 NOMO2Q5JPE7 1267 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 PIK3R6Q5UE93 754 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 LCN1P1Q5VSP4 162 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 ANKRD46Q86W74 232 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 ZBTB2Q8N680 514 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 GPR152Q8TDT2 470 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 CLEC4DQ8WXI8 215 aa16.97■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC30A4O14863 429 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 MPZL2O60487 215 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 RGS20O76081 388 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 IFNW1P05000 195 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 MBTD1Q05BQ5 628 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 HNRNPDQ14103 355 aaKnown RBP16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 GCNT6Q5T4J0 391 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 TAC4Q86UU9 113 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 GLB1L3Q8NCI6 653 aaPredicted RBP16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 SEC14L1Q92503 715 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 RHBGQ9H310 441 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 SEC14L3Q9UDX4 400 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 STOML2Q9UJZ1 356 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 ARPC2O15144 300 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 TSPAN1O60635 241 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 LINGO3P0C6S8 592 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 TAS2R41P59536 307 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 RHDQ02161 417 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 SNAPC1Q16533 368 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 EPGNQ6UW88 154 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 MEIOBQ8N635 442 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 OR6K2Q8NGY2 324 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 PPTC7Q8NI37 304 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 GRPEL2Q8TAA5 225 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 CNTN3Q9P232 1028 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 RPL4P36578 427 aaKnown RBP16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 SUN5Q8TC36 379 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 SNX10Q9Y5X0 201 aa16.96■□□□□ 0.31
PTP4A1-201ENST00000370651 HLA-DQA2P01906 255 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 PRPS2P11908 318 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 CDH1P12830 882 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 IMPDH1P20839 514 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 GPR1P46091 355 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 NDUFV1P49821 464 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 TUBA4AP68366 448 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 CACNG1Q06432 222 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 RNF44Q7L0R7 432 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 SOCS4Q8WXH5 440 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms