RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TP53BP1Q12888 1972 aaPredicted RBP15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 OR2AG2A6NM03 316 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 C4orf47A7E2U8 309 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 LMO7DNF2Z398 122 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 PRMT5O14744 637 aaPredicted RBP15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 SCAMP1O15126 338 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 FLRT2O43155 660 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 GDF9O60383 454 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 SDC3O75056 442 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 VCLP18206 1134 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 MCM3P25205 808 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 PRLHRP49683 370 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 IL9RQ01113 521 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 C3orf62Q6ZUJ4 267 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 CHST15Q7LFX5 561 aaPredicted RBP15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 KANSL1Q7Z3B3 1105 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 ZNF547Q8IVP9 402 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 KIAA2013Q8IYS2 634 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 SLC25A45Q8N413 288 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 SGF29Q96ES7 293 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 C9orf72Q96LT7 481 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 DUSP23Q9BVJ7 150 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 BOCQ9BWV1 1114 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 CLPBQ9H078 707 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 PPANQ9NQ55 473 aaKnown RBP15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 IL1RAPL1Q9NZN1 696 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 LRP4O75096 1905 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 ADAMTS9Q9P2N4 1935 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 PLXNB3Q9ULL4 1909 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 TMEM131Q92545 1883 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 OR56A5P0C7T3 313 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 ERVK-10P10266 1014 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 ALPPL2P10696 532 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 RPS3P23396 243 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 SSTR1P30872 391 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 GRK6P43250 576 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 CLCNKAP51800 687 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 CTSCP53634 463 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 CTBSQ01459 385 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 MGAT5Q09328 741 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 WDR93Q6P2C0 686 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 CRTC3Q6UUV7 619 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 DET1Q7L5Y6 550 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 C11orf96Q7Z7L8 435 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 GALNT7Q86SF2 657 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 LDB1Q86U70 411 aaPredicted RBP15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 CDKL2Q92772 493 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 TSSK1BQ9BXA7 367 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 LRRC4CQ9HCJ2 640 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 IARS2Q9NSE4 1012 aaKnown RBP15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 UCKL1Q9NWZ5 548 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 NSMCE4AQ9NXX6 385 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 NLGN3Q9NZ94 848 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 ZFATQ9P243 1243 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 FBXO5Q9UKT4 447 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 DOLKQ9UPQ8 538 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 PRKAB1Q9Y478 270 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 PCDHB1Q9Y5F3 818 aa15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 PCYT1BQ9Y5K3 369 aaPredicted RBP15.31■□□□□ 0.04
PRPF38B-202ENST00000370022 C17orf113A0A1B0GUU1 675 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 SGTAO43765 313 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 OR1I1O60431 355 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 S1PR4O95977 384 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 FTH1P02794 183 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 TUBBP07437 444 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 ANXA6P08133 673 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 ACP5P13686 325 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 STX2P32856 288 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 PHBP35232 272 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 SLC1A2P43004 574 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 LEPRP48357 1165 aaKnown RBP15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 DMPKQ09013 629 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 ILF2Q12905 390 aaKnown RBP15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 C1orf61Q13536 156 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 INSCQ1MX18 579 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 UAP1L1Q3KQV9 507 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 TEDDM1Q5T9Z0 273 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 TRMT10BQ6PF06 316 aaKnown RBP15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 TAF8Q7Z7C8 310 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 AMZ2Q86W34 360 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 GATAD2AQ86YP4 633 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 DENND6AQ8IWF6 608 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 UNC5BQ8IZJ1 945 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 CLDN19Q8N6F1 224 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 C2CD4AQ8NCU7 369 aaPredicted RBP15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 LPGAT1Q92604 370 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 P2RY12Q9H244 342 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 GNPTGQ9UJJ9 305 aa15.3■□□□□ 0.04
PRPF38B-202ENST00000370022 TCRBV9S1A1TA0A576 114 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 MGAT4DA6NG13 374 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 H3BMM5 538 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 YY2O15391 372 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 POP7O75817 140 aaKnown RBP15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 ESR1P03372 595 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 CD59P13987 128 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 SDHBP21912 280 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 ACTR1BP42025 376 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 GPX6P59796 221 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms