RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GPR62Q9BZJ7 368 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 CRISPLD1Q9H336 500 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 CWH43Q9H720 699 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 NANOGQ9H9S0 305 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 GALPQ9UBC7 116 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 EIF2B4Q9UI10 523 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 FKBPLQ9UIM3 349 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PCDHB3Q9Y5E6 796 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PCDHB1Q9Y5F3 818 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 FADS3Q9Y5Q0 445 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ST14Q9Y5Y6 855 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 TANC1Q9C0D5 1861 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 TTC3P53804 2025 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 FAM149AA5PLN7 773 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 ANKRD66B4E2M5 251 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 H0YAE9 185 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 TPST1O60507 370 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 NIPSNAP2O75323 286 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 CDH1P12830 882 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 UGT1A6P19224 532 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 RPS9P46781 194 aaKnown RBP14.13□□□□□ -0.15
CD48-201ENST00000368045 SREBF2Q12772 1141 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 TRIM32Q13049 653 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 MBTPS1Q14703 1052 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 TIGD2Q4W5G0 525 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 PSAPL1Q6NUJ1 521 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 ANKS3Q6ZW76 656 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 ADAMTSL2Q86TH1 951 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 ABI1Q8IZP0 508 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 FNDC5Q8NAU1 212 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 OR2T11Q8NH01 316 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 PNPT1Q8TCS8 783 aaKnown RBP14.13□□□□□ -0.15
CD48-201ENST00000368045 BPIFB1Q8TDL5 484 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 BDH2Q9BUT1 245 aa14.13□□□□□ -0.15
CD48-201ENST00000368045 A0A1B0GVM2 712 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 NCF1BA6NI72 391 aaPredicted RBP14.12□□□□□ -0.15
CD48-201ENST00000368045 NCF1CA8MVU1 366 aaPredicted RBP14.12□□□□□ -0.15
CD48-201ENST00000368045 E5RI56 91 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ENPP3O14638 875 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 EI24O14681 340 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 OR4F21O95013 312 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ALDH2P05091 517 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 GNAO1P09471 354 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 MTHFD1P11586 935 aaKnown RBP14.12□□□□□ -0.15
CD48-201ENST00000368045 NCF1P14598 390 aaPredicted RBP14.12□□□□□ -0.15
CD48-201ENST00000368045 CDH15P55291 814 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 DUSP4Q13115 394 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 TGFBIQ15582 683 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 SMU1Q2TAY7 513 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ZRANB3Q5FWF4 1079 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 CERS6Q6ZMG9 384 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ZNF783Q6ZMS7 281 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 RNF165Q6ZSG1 346 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 FAM43BQ6ZT52 329 aaPredicted RBP14.12□□□□□ -0.15
CD48-201ENST00000368045 RNF180Q86T96 592 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 CARNMT1Q8N4J0 409 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ZNF420Q8TAQ5 688 aaPredicted RBP14.12□□□□□ -0.15
CD48-201ENST00000368045 GRIN3AQ8TCU5 1115 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 PROKR1Q8TCW9 393 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 CYGBQ8WWM9 190 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 BIRC7Q96CA5 298 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 SEZ6LQ9BYH1 1024 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 P2RY12Q9H244 342 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 DHRS7Q9Y394 339 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ZNF711Q9Y462 761 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 ACTL7AQ9Y615 435 aa14.12□□□□□ -0.15
CD48-201ENST00000368045 CA12O43570 354 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 OR1I1O60431 355 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 S100BP04271 92 aaPredicted RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 MSH3P20585 1137 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 IL12AP29459 219 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CCND3P30281 292 aaPredicted RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 CDKN1CP49918 316 aaPredicted RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 APLP1P51693 650 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ACLYP53396 1101 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ERVPABLB-1P60509 514 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 RPS24P62847 133 aaKnown RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 YBX1P67809 324 aaKnown RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 CACNG1Q06432 222 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CRY1Q16526 586 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CYBRD1Q53TN4 286 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 HECTD3Q5T447 861 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 FUT10Q6P4F1 479 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 Q6ZSR9 355 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 USP51Q70EK9 711 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 IFNEQ86WN2 208 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CROCCP3Q8IVE0 287 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CPNE9Q8IYJ1 553 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CDYL2Q8N8U2 506 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 GIPC2Q8TF65 315 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CNDP2Q96KP4 475 aaKnown RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 NSMCE2Q96MF7 247 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ACOX2Q99424 681 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 C19orf43Q9BQ61 176 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 NACA2Q9H009 215 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 MARCH5Q9NX47 278 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 PKD2L2Q9NZM6 624 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CDH7Q9ULB5 785 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms