RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 KLHL3Q9UH77 587 aa12.25□□□□□ -0.45
MRPL55-209ENST00000366735 TTC7AQ9ULT0 858 aaPredicted RBP12.25□□□□□ -0.45
MRPL55-209ENST00000366735 NOVA2Q9UNW9 492 aaKnown RBP12.25□□□□□ -0.45
MRPL55-209ENST00000366735 KCTD3Q9Y597 815 aa12.25□□□□□ -0.45
MRPL55-209ENST00000366735 CCDC66A2RUB6 948 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CTAGE15A4D2H0 777 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 ZNF185O15231 689 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 TOX3O15405 576 aaPredicted RBP12.24□□□□□ -0.45
MRPL55-209ENST00000366735 NUAK1O60285 661 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 VIPP01282 170 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 KRT7P08729 469 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CTAGE8P0CG41 777 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 GJC1P36383 396 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 STAT5AP42229 794 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CLCNKAP51800 687 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 DPYSL3Q14195 570 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 PTPRRQ15256 657 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 INSCQ1MX18 579 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 COLEC12Q5KU26 742 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 RFLNAQ6ZTI6 216 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CTAGE6Q86UF2 777 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 NAV2Q8IVL1 2488 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CTAGE4Q8IX94 777 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 RASGEF1CQ8N431 466 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.24□□□□□ -0.45
MRPL55-209ENST00000366735 UBL4BQ8N7F7 174 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 KCTD6Q8NC69 237 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 ACTRT1Q8TDG2 376 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 HDAC11Q96DB2 347 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 TSGA13Q96PP4 275 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 AGAP2Q99490 1192 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CTRCQ99895 268 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 ZSCAN5AQ9BUG6 496 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 ULBP3Q9BZM4 244 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 UCK1Q9HA47 277 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 CPNE7Q9UBL6 633 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 TBC1D29Q9UFV1 150 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 PACSIN2Q9UNF0 486 aaPredicted RBP12.24□□□□□ -0.45
MRPL55-209ENST00000366735 PCDHA3Q9Y5H8 950 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 MAST4O15021 2626 aa12.24□□□□□ -0.45
MRPL55-209ENST00000366735 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 A0A0U1RQS6 177 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 LOC101059948A0A1B0GTJ6 334 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 ANKRD66B4E2M5 251 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 MKRN2OSH3BPM6 223 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 DYNC1I1O14576 645 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 DLGAP3O95886 979 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 HLA-DQB2P05538 268 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 AMD1P17707 334 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 CTNNA1P35221 906 aaKnown RBP12.23□□□□□ -0.45
MRPL55-209ENST00000366735 PAFAH1B1P43034 410 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 DCDC1P59894 354 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 FOXM1Q08050 763 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 SKIDA1Q1XH10 827 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 DEFB109BQ30KR1 87 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 TXNRD3NBQ6F5E7 133 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 C16orf46Q6P387 395 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 RBM12BQ8IXT5 1001 aaKnown RBP12.23□□□□□ -0.45
MRPL55-209ENST00000366735 CCDC13Q8IYE1 715 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 CCNYQ8ND76 341 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 LRRN4CLQ8ND94 238 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
MRPL55-209ENST00000366735 SPATA16Q9BXB7 569 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 POT1Q9NUX5 634 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 ANKMY1Q9P2S6 941 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 PRKAB1Q9Y478 270 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 OAS3Q9Y6K5 1087 aaKnown RBP12.23□□□□□ -0.45
MRPL55-209ENST00000366735 RPS6KL1Q9Y6S9 549 aa12.23□□□□□ -0.45
MRPL55-209ENST00000366735 A6NCN8 305 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 PDZK1P1A8MUH7 402 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 FADS2P1A8MWK0 482 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 NKX2-8O15522 239 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 SPOPO43791 374 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 RASSF9O75901 435 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 UBXN7O94888 489 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 SLC25A14O95258 325 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 EML2O95834 649 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 MT-ND3P03897 115 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 CD48P09326 243 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 VCLP18206 1134 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 XRCC1P18887 633 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 OAS2P29728 719 aaKnown RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 CXCR5P32302 372 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 CD86P42081 329 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 KLRB1Q12918 225 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 MMRN1Q13201 1228 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 UBAP2LQ14157 1087 aaKnown RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 IL11RAQ14626 422 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 CCDC181Q5TID7 509 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 LRRTM4Q86VH4 590 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 ATCAYQ86WG3 371 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 SEC14L1Q92503 715 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms