RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PSKH2Q96QS6 385 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 MAP3K3Q99759 626 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 STN1Q9H668 368 aaKnown RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 PDE7BQ9NP56 450 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 SLC40A1Q9NP59 571 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 WASH6PQ9NQA3 447 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 KLC4Q9NSK0 619 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 VPS18Q9P253 973 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 ATXN10Q9UBB4 475 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 EPHA6Q9UF33 1036 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 SNX7Q9UNH6 387 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 KLF2Q9Y5W3 355 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 MEN1O00255 615 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 DFFAO00273 331 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 LILRA1O75019 489 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 SOCS5O75159 536 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 SCRG1O75711 98 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 RAB40ALP0C0E4 278 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 CYP2A6P11509 494 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 KRT85P78386 507 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF235Q14590 738 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 LBRQ14739 615 aaKnown RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 MYBPC3Q14896 1274 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 SEPT7Q16181 437 aaKnown RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 HIF1AQ16665 826 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF789Q5FWF6 425 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 SCYL2Q6P3W7 929 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF765Q7L2R6 523 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 MRGPREQ86SM8 312 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 DSELQ8IZU8 1212 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 LZTR1Q8N653 840 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 AOPEPQ8N6M6 819 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 SIDT2Q8NBJ9 832 aaKnown RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 EXD1Q8NHP7 514 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 RELTQ969Z4 430 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF514Q96K75 400 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 PCDHB18PQ96TA0 734 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 C11orf70Q9BRQ4 267 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 NAA15Q9BXJ9 866 aaKnown RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 NLNQ9BYT8 704 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 PDCL3Q9H2J4 239 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 PRM3Q9NNZ6 103 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 FAM207AQ9NSI2 230 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 KCTD5Q9NXV2 234 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 NOCTQ9UK39 431 aaKnown RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 WDR37Q9Y2I8 494 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 PPIL1Q9Y3C6 166 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 FHOD1Q9Y613 1164 aa8.31□□□□□ -1.08
HMGB1P39-201ENST00000366304 MDC1Q14676 2089 aaKnown RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 TCRBV5S1A1TA0A578 114 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CCDC78A2IDD5 438 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 ARHGAP42A6NI28 874 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 OR5K4A6NMS3 321 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 FGF10O15520 208 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 GRID2O43424 1007 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 NUAK1O60285 661 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 FZD6O60353 706 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CPNE3O75131 537 aaKnown RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 KLF7O75840 302 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 GNA14O95837 355 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 VIPP01282 170 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 JCHAINP01591 159 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CYP1A1P04798 512 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 EDN3P14138 238 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 COX6B1P14854 86 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 BPIP17213 487 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 IL4RP24394 825 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 RPL10P27635 214 aaKnown RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 OTX2P32243 289 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 KIR3DL1P43629 444 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CLCNKAP51800 687 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 DRG2P55039 364 aaKnown RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 KCNK10P57789 538 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 TPI1P60174 286 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 OGDHQ02218 1023 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 SRSF11Q05519 484 aaKnown RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 IL10RBQ08334 325 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 PTCHD3Q3KNS1 767 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 KHDC1Q4VXA5 237 aaKnown RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 DCAF10Q5QP82 559 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 LYPLAL1Q5VWZ2 237 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CRTC3Q6UUV7 619 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 NLRP8Q86W28 1048 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 TMEM126BQ8IUX1 230 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF547Q8IVP9 402 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 GALNT16Q8N428 558 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 D2HGDHQ8N465 521 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 GPR150Q8NGU9 434 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 FAR1Q8WVX9 515 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZDHHC12Q96GR4 267 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CCDC120Q96HB5 630 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 SGSM3Q96HU1 749 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 FAM81BQ96LP2 452 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 TRAPPC9Q96Q05 1148 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms