RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TBC1D3CQ6IPX1 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 NIPA1Q7RTP0 329 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3Q8IZP1 549 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TRIM2Q9C040 744 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 EBF3Q9H4W6 596 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ALOX15BO15296 676 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 CABYRO75952 493 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 FSHRP23945 695 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 CELF3Q5SZQ8 465 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TCEAL6Q6IPX3 200 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 RFWD3Q6PCD5 774 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 OR4K2Q8NGD2 314 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ARMC5Q96C12 935 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 NODALQ96S42 347 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 NT5C1B-RDH14C9J2C7 533 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 PLOD2O00469 737 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 B4GALT5O43286 388 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 ATF6P18850 670 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CD247P20963 164 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 HSPA7P48741 367 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 RGS8P57771 180 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 RTP1P59025 263 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 VLDLRP98155 873 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 KLF1Q13351 362 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 OGFRL1Q5TC84 451 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 TRIM43Q96BQ3 446 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CCL22O00626 93 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 MYCLP1P12525 358 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 UBA1P22314 1058 aaKnown RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 ELP6Q0PNE2 266 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 FASTKD3Q14CZ7 662 aaKnown RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 LAPTM4BQ86VI4 370 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 GALNT15Q8N3T1 639 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 FCRL2Q96LA5 508 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 MRTO4Q9UKD2 239 aaKnown RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 RPP40O75818 363 aaKnown RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CCNB2O95067 398 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 KIR3DL1P43629 444 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 DCDC1P59894 354 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 GTF2H2Q13888 395 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 LIN52Q52LA3 116 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 GTF2H2CQ6P1K8 395 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 UROC1Q96N76 676 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 MTMR9Q96QG7 549 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 AIF1LQ9BQI0 150 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 DDX4Q9NQI0 724 aaKnown RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 A0A1W2PQ67 120 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 TBX1O43435 398 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 PAPSS2O95340 614 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 TGDSO95455 350 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 LAMP2P13473 410 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CDH4P55283 916 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 IL17AQ16552 155 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 PIWIL1Q96J94 861 aaKnown RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 KCTD15Q96SI1 283 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-203ENST00000359759 COMMD4Q9H0A8 199 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF639Q9UID6 485 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CTNNB1P35222 781 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CCL23P55773 120 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 ZFPM1Q8IX07 1006 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 OR10A6Q8NH74 314 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CDCA5Q96FF9 252 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CCDC120Q96HB5 630 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF350Q9GZX5 532 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 UPB1Q9UBR1 384 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF69Q9UC07 566 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 CNTNAP4Q9C0A0 1308 aa15.89■□□□□ 0.13
COL18A1-203ENST00000359759 GLYATL1P3A0A0U1RQE8 302 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 FGF1P05230 155 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 OR2B6P58173 313 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 CXCL17Q6UXB2 119 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 MCEMP1Q8IX19 187 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ABHD16BQ9H3Z7 469 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 PCDH18Q9HCL0 1135 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 MAU2Q9Y6X3 613 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ABCA6Q8N139 1617 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 SLC9A3R1O14745 358 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 MAPK8P45983 427 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 PHC1P78364 1004 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 MRPS6P82932 125 aaKnown RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 C12orf50Q8NA57 414 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 GPR21Q99679 349 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 IFT80Q9P2H3 777 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 BTNL10A8MVZ5 291 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 SEPT4O43236 478 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 GATBO75879 557 aaKnown RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 C2P06681 752 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 GANABQ14697 944 aaKnown RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ZCCHC10Q8TBK6 192 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 MFSD14AQ96MC6 490 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF558Q96NG5 402 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ARL3P36405 182 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 MATKP42679 507 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 PRAMEF17Q5VTA0 474 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 BBS12Q6ZW61 710 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 FOXRED2Q8IWF2 684 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 COQ8BQ96D53 544 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms