RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 A0A1B0GVM2 712 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 TCAF2A6NFQ2 919 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 E7ENX8 843 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 PSMD11O00231 422 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 EFNA1P20827 205 aaPredicted RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 CAPGP40121 348 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 NADK2Q4G0N4 442 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 TREML1Q86YW5 311 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 PIH1D2Q8WWB5 315 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 FEM1AQ9BSK4 669 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 SPATA5L1Q9BVQ7 753 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 THG1LQ9NWX6 298 aaKnown RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 PDE10AQ9Y233 779 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 A8MT66 165 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 SLC22A2O15244 555 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 TBX18O95935 607 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 HLA-DQB2P05538 268 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 ELFN1P0C7U0 828 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 TCEAL1Q15170 157 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 NAT16Q8N8M0 369 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 CXorf40AQ8TE69 158 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 FBXO10Q9UK96 956 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 SSR3Q9UNL2 185 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 ARL5AQ9Y689 179 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 FPGTO14772 594 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 HAT1O14929 419 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 STBD1O95210 358 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 ESR1P03372 595 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 SCNN1AP37088 669 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 CCR3P51677 355 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 CDH15P55291 814 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 OLR1P78380 273 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 SLC10A7Q0GE19 358 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 PYDC2Q56P42 97 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 BHLHB9Q6PI77 547 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 OR9I1Q8NGQ6 314 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 ASB9Q96DX5 294 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 MRPL39Q9NYK5 338 aaKnown RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 UBAP1Q9NZ09 502 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 KIAA1522Q9P206 1035 aaPredicted RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 OAZ3Q9UMX2 235 aa13.59□□□□□ -0.23
VCP-201ENST00000358901 ZFP37Q9Y6Q3 630 aaPredicted RBP13.59□□□□□ -0.23
VCP-201ENST00000358901 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.58□□□□□ -0.23
VCP-201ENST00000358901 CCDC182A6NF36 153 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 LOC110117498-PIK3R3F6TDL0 507 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 SLC9A3R1O14745 358 aaPredicted RBP13.58□□□□□ -0.23
VCP-201ENST00000358901 TULP3O75386 442 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 SCELO95171 688 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 ASGR1P07306 291 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 IMPDH1P20839 514 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 PSMA3P25788 255 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 ALDH4A1P30038 563 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 SPAM1P38567 509 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.23
VCP-201ENST00000358901 OGFOD2Q6N063 350 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 SLC13A3Q8WWT9 602 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 PPP1R16AQ96I34 528 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 TRIM39Q9HCM9 518 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 MIOSQ9NXC5 875 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 CFAP97Q9P2B7 532 aa13.58□□□□□ -0.23
VCP-201ENST00000358901 IFT80Q9P2H3 777 aaPredicted RBP13.58□□□□□ -0.23
VCP-201ENST00000358901 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 hCG_2039718K7EN88 272 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 IDH3BO43837 385 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 SLC28A2O43868 658 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 NUDT14O95848 222 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 HOXB6P17509 224 aaKnown RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 CHIT1Q13231 466 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 C1orf220Q5T0J3 134 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 CDHR3Q6ZTQ4 885 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.245e-8■■■■■ 38.3
VCP-201ENST00000358901 C1GALT1C1Q96EU7 318 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 TNKS2Q9H2K2 1166 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 ADAM7Q9H2U9 754 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 GTF2IRD1Q9UHL9 959 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 TTC24A2A3L6 582 aaPredicted RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 ANXA4P09525 319 aaPredicted RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 BMP7P18075 431 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 MAPK9P45984 424 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 MAPKAPK2P49137 400 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 ARHGAP1Q07960 439 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 MERTKQ12866 999 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 MTAPQ13126 283 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 GNA13Q14344 377 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 CAND1Q86VP6 1230 aaKnown RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 LIX1Q8N485 282 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 OR52L1Q8NGH7 329 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 VANGL1Q8TAA9 524 aaPredicted RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 FAR1Q8WVX9 515 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms