RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 EEFSECP57772 596 aaKnown RBP8.5□□□□□ -1.05
RFX3-202ENST00000358730 ESRRGP62508 458 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 C5orf22Q49AR2 442 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 RTP2Q5QGT7 225 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 C6orf136Q5SQH8 315 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 NANOGP8Q6NSW7 305 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 SLC2A7Q6PXP3 512 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 FRA10AC1Q70Z53 315 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 SPRED1Q7Z699 444 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 ERI1Q8IV48 349 aaKnown RBP8.5□□□□□ -1.05
RFX3-202ENST00000358730 KCNJ9Q92806 393 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 PLEKHG4BQ96PX9 1271 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 ZNF382Q96SR6 550 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 SEPHS2Q99611 448 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 NANOGQ9H9S0 305 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 MARCH5Q9NX47 278 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 ZIM2Q9NZV7 527 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 HSFX1Q9UBD0 423 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 PHF24Q9UPV7 400 aa8.5□□□□□ -1.05
RFX3-202ENST00000358730 FAM234BA2RU67 622 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 IQCF5A8MTL0 148 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ACOX3O15254 700 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CLOCKO15516 846 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 GJB5O95377 273 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 LDLRP01130 860 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ELNP15502 786 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CST5P28325 142 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 ERVPABLB-1P60509 514 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 PRKG2Q13237 762 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TGFBIQ15582 683 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 RGMBQ6NW40 437 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 LETMD1Q6P1Q0 360 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 FUT10Q6P4F1 479 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TAS2R42Q7RTR8 314 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ZFAND4Q86XD8 727 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CLVS1Q8IUQ0 354 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 TBC1D21Q8IYX1 336 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 PROKR1Q8TCW9 393 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 MAGEE2Q8TD90 523 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 VPS50Q96JG6 964 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ADGRE3Q9BY15 652 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 RPF2Q9H7B2 306 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 C8orf4Q9NR00 106 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 SMPD3Q9NY59 655 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 FADS3Q9Y5Q0 445 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 THSD7BQ9C0I4 1608 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 ANKRD66B4E2M5 251 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 NT5C1B-RDH14C9J2C7 533 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CLDN11O75508 207 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ENO2P09104 434 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 C7P10643 843 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 RPS9P46781 194 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 HTR6P50406 440 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 FAM189BP81408 668 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TWF1Q12792 350 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ZNF177Q13360 481 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 NR6A1Q15406 480 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 AARS2Q5JTZ9 985 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 IL27RAQ6UWB1 636 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 LINGO4Q6UY18 593 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TTC16Q8NEE8 873 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 FAM81AQ8TBF8 368 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 OSCP1Q8WVF1 389 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 GAB3Q8WWW8 586 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CDK5RAP1Q96SZ6 601 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 LRRC3Q9BY71 257 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 SOX17Q9H6I2 414 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 CD320Q9NPF0 282 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TMEM161AQ9NX61 479 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TUBA8Q9NY65 449 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 PTBP2Q9UKA9 531 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 hCG_2014768A0A024R1R8 64 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 KANSL1LA0AUZ9 987 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ILVBLA1L0T0 632 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TSPAN3O60637 253 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CAPN1P07384 714 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 IRF1P10914 325 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 UMPSP11172 480 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 HRH2P25021 359 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 HTR1EP28566 365 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 CORO1AP31146 461 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 CAPGP40121 348 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 SLC11A1P49279 550 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ACLYP53396 1101 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 OR4D2P58180 307 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 MTPNP58546 118 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 TRAF2Q12933 501 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 DCTN2Q13561 401 aaKnown RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 PRSS55Q6UWB4 352 aaPredicted RBP8.49□□□□□ -1.05
RFX3-202ENST00000358730 ABRAXAS1Q6UWZ7 409 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 Q6ZSR9 355 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 C16orf59Q7L2K0 433 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 DHRSXQ8N5I4 330 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 METTL6Q8TCB7 284 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 ISOC1Q96CN7 298 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 PPM1MQ96MI6 270 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 RNF145Q96MT1 663 aa8.49□□□□□ -1.05
RFX3-202ENST00000358730 COMMD8Q9NX08 183 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms