RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ERVMER34-1Q9H9K5 563 aa15.04■□□□□ -0
TPM1-206ENST00000358278 APOBEC3BQ9UH17 382 aaKnown RBP15.04■□□□□ -0
TPM1-206ENST00000358278 RABGEF1Q9UJ41 708 aa15.04■□□□□ -0
TPM1-206ENST00000358278 GNPTGQ9UJJ9 305 aa15.04■□□□□ -0
TPM1-206ENST00000358278 PSAT1Q9Y617 370 aa15.04■□□□□ -0
TPM1-206ENST00000358278 DGKBQ9Y6T7 804 aa15.04■□□□□ -0
TPM1-206ENST00000358278 FAM186AA6NE01 2351 aa15.04■□□□□ -0
TPM1-206ENST00000358278 F8W8V4 182 aa15.03■□□□□ -0
TPM1-206ENST00000358278 H3BM21 787 aa15.03■□□□□ -0
TPM1-206ENST00000358278 QSOX1O00391 747 aa15.03■□□□□ -0
TPM1-206ENST00000358278 ARHGAP33O14559 1287 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CHUKO15111 745 aa15.03■□□□□ -0
TPM1-206ENST00000358278 SCAMP1O15126 338 aa15.03■□□□□ -0
TPM1-206ENST00000358278 GRID2O43424 1007 aa15.03■□□□□ -0
TPM1-206ENST00000358278 TNFP01375 233 aa15.03■□□□□ -0
TPM1-206ENST00000358278 OR56A5P0C7T3 313 aa15.03■□□□□ -0
TPM1-206ENST00000358278 LEPRP48357 1165 aaKnown RBP15.03■□□□□ -0
TPM1-206ENST00000358278 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 CTSCP53634 463 aa15.03■□□□□ -0
TPM1-206ENST00000358278 ATXN3P54252 364 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 IRX4P78413 519 aa15.03■□□□□ -0
TPM1-206ENST00000358278 NHLH1Q02575 133 aa15.03■□□□□ -0
TPM1-206ENST00000358278 SPEM2Q0P670 501 aa15.03■□□□□ -0
TPM1-206ENST00000358278 NAB1Q13506 487 aa15.03■□□□□ -0
TPM1-206ENST00000358278 SLC29A2Q14542 456 aa15.03■□□□□ -0
TPM1-206ENST00000358278 KLHL38Q2WGJ6 581 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PLA2G4EQ3MJ16 856 aa15.03■□□□□ -0
TPM1-206ENST00000358278 ZNF789Q5FWF6 425 aa15.03■□□□□ -0
TPM1-206ENST00000358278 TMEM220Q6QAJ8 160 aa15.03■□□□□ -0
TPM1-206ENST00000358278 GALNT7Q86SF2 657 aa15.03■□□□□ -0
TPM1-206ENST00000358278 LRRC6Q86X45 466 aa15.03■□□□□ -0
TPM1-206ENST00000358278 OR2M4Q96R27 311 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CPNE1Q99829 537 aa15.03■□□□□ -0
TPM1-206ENST00000358278 GTPBP2Q9BX10 602 aaKnown RBP15.03■□□□□ -0
TPM1-206ENST00000358278 FUT8Q9BYC5 575 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PNMA8BQ9ULN7 279 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 PRKAB1Q9Y478 270 aa15.03■□□□□ -0
TPM1-206ENST00000358278 GPSM3Q9Y4H4 160 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PCDHB1Q9Y5F3 818 aa15.03■□□□□ -0
TPM1-206ENST00000358278 EXOC1LA0A1B0GW35 172 aa15.03■□□□□ -0
TPM1-206ENST00000358278 KMOO15229 486 aa15.03■□□□□ -0
TPM1-206ENST00000358278 HAUS5O94927 633 aa15.03■□□□□ -0
TPM1-206ENST00000358278 AP2A2O94973 939 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CER1O95813 267 aa15.03■□□□□ -0
TPM1-206ENST00000358278 FUCA1P04066 466 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CSF2P04141 144 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CTSEP14091 401 aa15.03■□□□□ -0
TPM1-206ENST00000358278 NME1P15531 152 aaKnown RBP15.03■□□□□ -0
TPM1-206ENST00000358278 ENGP17813 658 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PBLDP30039 288 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 FMO4P31512 558 aa15.03■□□□□ -0
TPM1-206ENST00000358278 HSD17B3P37058 310 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CD151P48509 253 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PRLHRP49683 370 aa15.03■□□□□ -0
TPM1-206ENST00000358278 HNRNPKP61978 463 aaKnown RBP eCLIP15.03■□□□□ -0
TPM1-206ENST00000358278 TCEA2Q15560 299 aa15.03■□□□□ -0
TPM1-206ENST00000358278 UAP1Q16222 522 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 INSCQ1MX18 579 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PYCR3Q53H96 274 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PRAMEF14Q5SWL7 426 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PTRHD1Q6GMV3 140 aaKnown RBP15.03■□□□□ -0
TPM1-206ENST00000358278 CNSTQ6PJW8 725 aa15.03■□□□□ -0
TPM1-206ENST00000358278 CHST15Q7LFX5 561 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 BEND7Q8N7W2 519 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 MRRFQ96E11 262 aaKnown RBP15.03■□□□□ -0
TPM1-206ENST00000358278 SCARF2Q96GP6 870 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 ATXN7L3BQ96GX2 97 aa15.03■□□□□ -0
TPM1-206ENST00000358278 ELF4Q99607 663 aaPredicted RBP15.03■□□□□ -0
TPM1-206ENST00000358278 GAREM1Q9H706 876 aa15.03■□□□□ -0
TPM1-206ENST00000358278 KLF15Q9UIH9 416 aa15.03■□□□□ -0
TPM1-206ENST00000358278 GPR34Q9UPC5 381 aa15.03■□□□□ -0
TPM1-206ENST00000358278 IKBKGQ9Y6K9 419 aa15.03■□□□□ -0
TPM1-206ENST00000358278 PRSS21Q9Y6M0 314 aa15.03■□□□□ -0
TPM1-206ENST00000358278 ANKRD12Q6UB98 2062 aa15.02■□□□□ -0
TPM1-206ENST00000358278 ARID1BQ8NFD5 2236 aaPredicted RBP15.02■□□□□ -0
TPM1-206ENST00000358278 PROB1E7EW31 1015 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 LRP3O75074 770 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 C1QAP02745 245 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 AHSGP02765 367 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 FTH1P02794 183 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 ESR1P03372 595 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 ZNF806P0C7X5 589 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 RPS3P23396 243 aaKnown RBP eCLIP15.02□□□□□ -0.01
TPM1-206ENST00000358278 ABCG1P45844 678 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 ADARP55265 1226 aaKnown RBP15.02□□□□□ -0.01
TPM1-206ENST00000358278 HLA-BQ31612 363 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 BCL7AQ4VC05 210 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 PRRT3Q5FWE3 981 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 ZNF547Q8IVP9 402 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 TSSK1BQ9BXA7 367 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 P2RY12Q9H244 342 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 EPB41L4BQ9H329 900 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 TCEAL2Q9H3H9 227 aaPredicted RBP15.02□□□□□ -0.01
TPM1-206ENST00000358278 RAPGEFL1Q9UHV5 662 aa15.02□□□□□ -0.01
TPM1-206ENST00000358278 PCYT1BQ9Y5K3 369 aaPredicted RBP15.02□□□□□ -0.01
TPM1-206ENST00000358278 ASCC3Q8N3C0 2202 aaKnown RBP15.02□□□□□ -0.01
TPM1-206ENST00000358278 LNP1A1A4G5 178 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 E5RI56 91 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 POC1B-GALNT4F8VUJ3 575 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 DFNA5O60443 496 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms