RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 TULP3O75386 442 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 PENKP01210 267 aaPredicted RBP17.41■□□□□ 0.38
NPAS3-202ENST00000356141 C1SP09871 688 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 TBL3Q12788 808 aaKnown RBP17.41■□□□□ 0.38
NPAS3-202ENST00000356141 CDKN3Q16667 212 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 TBC1D25Q3MII6 688 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 LMNTD2Q8IXW0 634 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 PELI3Q8N2H9 469 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 FGF13Q92913 245 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 KIAA1191Q96A73 305 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 TUBGCP3Q96CW5 907 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 HS3ST2Q9Y278 367 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 OAS3Q9Y6K5 1087 aaKnown RBP17.41■□□□□ 0.38
NPAS3-202ENST00000356141 GON4LQ3T8J9 2241 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 A0A088AWK7 358 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.41■□□□□ 0.38
NPAS3-202ENST00000356141 F8W8V4 182 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 OR4F21O95013 312 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 XPAP23025 273 aaPredicted RBP17.41■□□□□ 0.38
NPAS3-202ENST00000356141 SPAM1P38567 509 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 TGFBIQ15582 683 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 AAK1Q2M2I8 961 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 MPP7Q5T2T1 576 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 GDPD4Q6W3E5 623 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 USP45Q70EL2 814 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 LILRA3Q8N6C8 439 aaPredicted RBP17.41■□□□□ 0.38
NPAS3-202ENST00000356141 ATP6V1E2Q96A05 226 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 PYCR2Q96C36 320 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 HGH1Q9BTY7 390 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 TUBB1Q9H4B7 451 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 HACD3Q9P035 362 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 ZNF232Q9UNY5 417 aa17.41■□□□□ 0.38
NPAS3-202ENST00000356141 MUC3AQ02505 3323 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 CCNT2O60583 730 aaKnown RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 KERAO60938 352 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 ADH5P11766 374 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 PTGER3P43115 390 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 ARHGEF7Q14155 803 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 ELMSAN1Q6PJG2 1045 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 SLC22A9Q8IVM8 553 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 SPDYE1Q8NFV5 336 aaPredicted RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 TWIST2Q8WVJ9 160 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 C19orf60Q96EN9 201 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 AKTIPQ9H8T0 292 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 EML4Q9HC35 981 aaKnown RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 PCDH12Q9NPG4 1184 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 KNL1Q8NG31 2342 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 AXIN1O15169 862 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 ZNF7P17097 686 aaPredicted RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 ACRV1P26436 265 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 PPARGP37231 505 aaPredicted RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 CASP2P42575 452 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 DNAJB13P59910 316 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 SNX20Q7Z614 316 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 SYVN1Q86TM6 617 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 STMN2Q93045 179 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 CMTM5Q96DZ9 223 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 SCRN2Q96FV2 425 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 DERL2Q9GZP9 239 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 NOL11Q9H8H0 719 aaKnown RBP17.4■□□□□ 0.38
NPAS3-202ENST00000356141 ZNF225Q9UK10 706 aa17.4■□□□□ 0.38
NPAS3-202ENST00000356141 RGSL1A5PLK6 1076 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 UBDO15205 165 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 POP4O95707 220 aaKnown RBP17.39■□□□□ 0.38
NPAS3-202ENST00000356141 ALDOCP09972 364 aaKnown RBP17.39■□□□□ 0.38
NPAS3-202ENST00000356141 B4GALNT1Q00973 533 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 VRK3Q8IV63 474 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 NPAS3Q8IXF0 933 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 HMGCLL1Q8TB92 370 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 PEX13Q92968 403 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 LRCH3Q96II8 777 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 P2RY12Q9H244 342 aa17.39■□□□□ 0.38
NPAS3-202ENST00000356141 PRR23AA6NEV1 266 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 TMEM202A6NGA9 273 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.37
NPAS3-202ENST00000356141 SOX9P48436 509 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 CYLC2Q14093 348 aaPredicted RBP17.39■□□□□ 0.37
NPAS3-202ENST00000356141 FNDC3BQ53EP0 1204 aaKnown RBP17.39■□□□□ 0.37
NPAS3-202ENST00000356141 TPRG1Q6ZUI0 275 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 STK40Q8N2I9 435 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 SLC26A7Q8TE54 656 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 CDRT15Q96T59 188 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 KXD1Q9BQD3 176 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 TMPRSS11EQ9UL52 423 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 MTCL1Q9Y4B5 1905 aaKnown RBP17.39■□□□□ 0.37
NPAS3-202ENST00000356141 CCDC85CA6NKD9 419 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 DPP6P42658 865 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 HTR6P50406 440 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 SUOXP51687 545 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 EPHA5P54756 1037 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 DIO3P55073 304 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 RALGDSQ12967 914 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 COL9A2Q14055 689 aaPredicted RBP17.39■□□□□ 0.37
NPAS3-202ENST00000356141 TCEA2Q15560 299 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 MMEL1Q495T6 779 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
NPAS3-202ENST00000356141 PPP2R2DQ66LE6 453 aa17.39■□□□□ 0.37
NPAS3-202ENST00000356141 TANGO2Q6ICL3 276 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms