RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 UPK3BL2E5RIL1 263 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 EIF3FO00303 357 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 E2F3O00716 465 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 AZIN1O14977 448 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TULP3O75386 442 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 LEFTY1O75610 366 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SLC25A14O95258 325 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 MLYCDO95822 493 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PRR35P0CG20 571 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CBSLP0DN79 551 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CYP2A6P11509 494 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ARSAP15289 507 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TSPAN8P19075 237 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 GNAZP19086 355 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 DGKAP23743 735 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 FSHRP23945 695 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 FCARP24071 287 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CBSP35520 551 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 GCKP35557 465 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 NNMTP40261 264 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PBX2P40425 430 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 NSG1P42857 185 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 RECQLP46063 649 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 NRIP1P48552 1158 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 MRPL19P49406 292 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 RGS4P49798 205 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CCNG1P51959 295 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 IRX1P78414 480 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SLC25A3Q00325 362 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SQLEQ14534 574 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TGFBIQ15582 683 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PPP1R3AQ16821 1122 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TRMT5Q32P41 509 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ATP13A5Q4VNC0 1218 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF805Q5CZA5 627 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ACSBG2Q5FVE4 666 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 WLSQ5T9L3 541 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 METTL2BQ6P1Q9 378 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TMC5Q6UXY8 1006 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 DPPA4Q7L190 304 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 NET1Q7Z628 596 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TECPR1Q7Z6L1 1165 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 GPR149Q86SP6 731 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ADAMTSL2Q86TH1 951 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SNX32Q86XE0 403 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 RASGRP3Q8IV61 690 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SCUBE1Q8IWY4 988 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 RAVER1Q8IY67 606 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ULK2Q8IYT8 1036 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CHCHD4Q8N4Q1 142 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ZBTB2Q8N680 514 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 NAT16Q8N8M0 369 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PDPRQ8NCN5 879 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 HMGCLL1Q8TB92 370 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TRPC4APQ8TEL6 797 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 UBTD2Q8WUN7 234 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 WDR60Q8WVS4 1066 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 FGF13Q92913 245 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SMARCD2Q92925 531 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 EXT2Q93063 718 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PBXIP1Q96AQ6 731 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 MCUR1Q96AQ8 359 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CATSPER2Q96P56 530 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF382Q96SR6 550 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 THTPAQ9BU02 230 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 TUBB1Q9H4B7 451 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 CD248Q9HCU0 757 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 MID1IP1Q9NPA3 183 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 RAD18Q9NS91 495 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SPATS2LQ9NUQ6 558 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 DZANK1Q9NVP4 752 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ELOVL2Q9NXB9 296 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 GDE1Q9NZC3 331 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PKD2L2Q9NZM6 624 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 NKX1-2Q9UD57 310 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SLC7A8Q9UHI5 535 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF225Q9UK10 706 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 PTBP2Q9UKA9 531 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SLC8A2Q9UPR5 921 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 FNDC3AQ9Y2H6 1198 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 OARD1Q9Y530 152 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ANKRD11Q6UB99 2663 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-203ENST00000350034 DOCK6Q96HP0 2047 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 ZDBF2Q9HCK1 2354 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 CFAP54Q96N23 3096 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF106Q9H2Y7 1883 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 LOC100653049A0A140TA62 436 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 OTOL1A6NHN0 477 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 EPOPA6NHQ4 379 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 C19orf67A6NJJ6 358 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 HEPACAM2A8MVW5 462 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MEI4A8MW99 385 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 A8MX80 341 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PRRT4C9JH25 899 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 UBDO15205 165 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SGTAO43765 313 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 BNIP3LO60238 219 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 VPS4BO75351 444 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms