RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 C3orf18Q9UK00 162 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 NYNRINQ9P2P1 1898 aaKnown RBP9.57□□□□□ -0.88
HOXA1-201ENST00000343060 BRWD3Q6RI45 1802 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 GABRDO14764 452 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 PMPCBO75439 489 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 CNTN5O94779 1100 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 KCNK2O95069 426 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 SEC24AO95486 1093 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 PTTG1O95997 202 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 GSNP06396 782 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 HOXA11P31270 313 aaPredicted RBP9.57□□□□□ -0.88
HOXA1-201ENST00000343060 CASP3P42574 277 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 MVKQ03426 396 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
HOXA1-201ENST00000343060 CDK5R2Q13319 367 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 SELPLGQ14242 412 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 NKG7Q16617 165 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 RFX4Q33E94 735 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 RAB41Q5JT25 222 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 ARTNQ5T4W7 220 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 TMEM236Q5W0B7 351 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 VASH1Q7L8A9 365 aaPredicted RBP9.57□□□□□ -0.88
HOXA1-201ENST00000343060 TOP6BLQ8N6T0 577 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 OR8J3Q8NGG0 315 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 COPS5Q92905 334 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 GLMNQ92990 594 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 TKTL2Q9H0I9 626 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
HOXA1-201ENST00000343060 SMOC2Q9H3U7 446 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 POLE4Q9NR33 117 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 PCDHGA10Q9Y5H3 936 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 MCM3APO60318 1980 aa9.57□□□□□ -0.88
HOXA1-201ENST00000343060 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
HOXA1-201ENST00000343060 A0A1B0GTL3 188 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 MROH6A6NGR9 719 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 A8MU76 341 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 PSMD11O00231 422 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ZNF37AP17032 561 aaPredicted RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 CYP2C18P33260 490 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 HTR7P34969 479 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 MASP1P48740 699 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 TAF6P49848 677 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 WNT3AP56704 352 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 CXCR4P61073 352 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 VBP1P61758 197 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SLC35A2P78381 396 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 MAPK11Q15759 364 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 VARS2Q5ST30 1063 aaKnown RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 AFMIDQ63HM1 303 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SLC27A1Q6PCB7 646 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 NECAB2Q7Z6G3 386 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 FAM86B1Q8N7N1 296 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ZNF599Q96NL3 588 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 NDEL1Q9GZM8 345 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 WDCPQ9H6R7 721 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 HEBP1Q9NRV9 189 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 TMEFF2Q9UIK5 374 aaPredicted RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 DFFAO00273 331 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SNPHO15079 494 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ASNA1O43681 348 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 PEX10O60683 326 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 KERAO60938 352 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 PRKD3O94806 890 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SERPINH1P50454 418 aaKnown RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 IST1P53990 364 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ADAM17P78536 824 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 PFKFB4Q16877 469 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SV2CQ496J9 727 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 XKR4Q5GH76 650 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 MANEALQ5VSG8 457 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ZNF549Q6P9A3 640 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ELMOD1Q8N336 334 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 NAT16Q8N8M0 369 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 OR52K2Q8NGK3 314 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 OR5K1Q8NHB7 308 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 PROKR1Q8TCW9 393 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 MCOLN3Q8TDD5 553 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 EXT2Q93063 718 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 TSPAN18Q96SJ8 248 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ASPSCR1Q9BZE9 553 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SPATC1LQ9H0A9 340 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 TP63Q9H3D4 680 aaPredicted RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 RGS18Q9NS28 235 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 MARCH4Q9P2E8 410 aaPredicted RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 SLCO3A1Q9UIG8 710 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 ERVW-1Q9UQF0 538 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 EIF3LQ9Y262 564 aaKnown RBP9.56□□□□□ -0.88
HOXA1-201ENST00000343060 HSPE1-MOB4S4R3N1 261 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 A3GALT2U3KPV4 340 aa9.56□□□□□ -0.88
HOXA1-201ENST00000343060 PABPN1LA6NDY0 278 aaKnown RBP9.55□□□□□ -0.88
HOXA1-201ENST00000343060 CLDN24A6NM45 220 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 CENPBD1B2RD01 187 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 IFRD1O00458 451 aaPredicted RBP9.55□□□□□ -0.88
HOXA1-201ENST00000343060 BCKDKO14874 412 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 NOBOXO60393 691 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 SNX2O60749 519 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 RECQL4O94761 1208 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 ANGPTL1O95841 491 aa9.55□□□□□ -0.88
HOXA1-201ENST00000343060 CST1P01037 141 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms