RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CENPBD1B2RD01 187 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ABLIM1O14639 778 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 GCATO75600 419 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ZNF3P17036 446 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 MASP1P48740 699 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 SLC22A8Q8TCC7 542 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 H3BSH0 61 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 TULP2O00295 520 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 PRMT5O14744 637 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 BTG3Q14201 252 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 UGT8Q16880 541 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CNPY1Q3B7I2 92 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CLEC17AQ6ZS10 378 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 TAS1R3Q7RTX0 852 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 TMEM192Q8IY95 271 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 C2orf73Q8N5S3 287 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 NAXEQ8NCW5 288 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 BBS1Q8NFJ9 593 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 LINGO1Q96FE5 620 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ZNF490Q9ULM2 529 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 GSC2O15499 205 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 BCAS1O75363 584 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 COL6A1P12109 1028 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 AHCYP23526 432 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 F8A1P23610 371 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 APLP1P51693 650 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 E2F1Q01094 437 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ARCQ7LC44 396 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 P4HA3Q7Z4N8 544 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 HJURPQ8NCD3 748 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 CXorf40AQ8TE69 158 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 POP5Q969H6 163 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 OR5B12Q96R08 314 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CDH19Q9H159 772 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 SPTBP11277 2137 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CHADO15335 359 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 NME6O75414 186 aaPredicted RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 FABP3P05413 133 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ALAS2P22557 587 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 GRIA1P42261 906 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 MAGEA3P43357 314 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 NANSQ9NR45 359 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 LYARQ9NX58 379 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 TRAV6A0A075B6T7 132 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 MPZL2O60487 215 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ZNF81P51508 661 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 CLCN3P51790 818 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ANTXR2P58335 489 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ZNF792Q3KQV3 632 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 AADACL2Q6P093 401 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 TATDN2Q93075 761 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 SGK2Q9HBY8 427 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 MAB21L2Q9Y586 359 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 NOX1Q9Y5S8 564 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 KCNE2Q9Y6J6 123 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 MSX1P28360 303 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 SLC6A4P31645 630 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 SLC9B1Q4ZJI4 515 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 OR5T2Q8NGG2 359 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ADAMTS15Q8TE58 950 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 AENQ8WTP8 325 aaKnown RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 PRICKLE1Q96MT3 831 aaPredicted RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 SCGB3A2Q96PL1 93 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ARID1AO14497 2285 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 C2orf92A0A1B0GVN3 265 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 INMTO95050 263 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 PPIBP23284 216 aaKnown RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP47-202ENST00000339865 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 CHSY3Q70JA7 882 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ELMOD2Q8IZ81 293 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 DNAAF1Q8NEP3 725 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 POLR2J2Q9GZM3 115 aaKnown RBP12.72□□□□□ -0.37
USP47-202ENST00000339865 GDF3Q9NR23 364 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 DPP7Q9UHL4 492 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 CFAP74Q9C0B2 1584 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 ELOVL7A1L3X0 281 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 MIPP30301 263 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 CCR10P46092 362 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 CDH8P55286 799 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 DNAJC18Q9H819 358 aa12.72□□□□□ -0.37
USP47-202ENST00000339865 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms