RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 UGT2B11O75310 529 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 SBK3P0C264 359 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 MYL4P12829 197 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 ITGALP20701 1170 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 PTPN3P26045 913 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 HTR1BP28222 390 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 GTF2E2P29084 291 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 RPL14P50914 215 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 PPP5CP53041 499 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 OR2B6P58173 313 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 GALNT3Q14435 633 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 USP10Q14694 798 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 SLC36A3Q495N2 470 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 ZNF544Q6NX49 715 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 PRRT2Q7Z6L0 340 aaPredicted RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 NDNFQ8TB73 568 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 TBC1D20Q96BZ9 403 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 HSFY1Q96LI6 401 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 LRRC40Q9H9A6 602 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 CYP4F12Q9HCS2 524 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 FNIP2Q9P278 1114 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 PRKAG2Q9UGJ0 569 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 I6L893 689 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 M0R3G1 203 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ATG13O75143 517 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SEC24AO95486 1093 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ERCC2P18074 760 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 NFKB1P19838 968 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 TSPAN7P41732 249 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 HTR3AP46098 478 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SLC12A1Q13621 1099 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 HIST2H2ACQ16777 129 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 PITRM1Q5JRX3 1037 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ZNF773Q6PK81 442 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 AMIGO1Q86WK6 493 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 NPWQ8N729 165 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 GALNT11Q8NCW6 608 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SHCBP1Q8NEM2 672 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SLC7A14Q8TBB6 771 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 CENPIQ92674 756 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 NELL1Q92832 810 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 FBXW5Q969U6 566 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 KCTD14Q9BQ13 255 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 FTHL17Q9BXU8 183 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 FBXO8Q9NRD0 319 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 OXSMQ9NWU1 459 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 GTSE1Q9NYZ3 720 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ERAP1Q9NZ08 941 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 CYB5R1Q9UHQ9 305 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PCOLCE2Q9UKZ9 415 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 MRPS7Q9Y2R9 242 aaKnown RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 SULT1B1O43704 296 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PRKD3O94806 890 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SLC4A1P02730 911 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 LGALS2P05162 132 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 TSPAN8P19075 237 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 TRIM23P36406 574 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PLK1P53350 603 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 MPP1Q00013 466 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 TOP3AQ13472 1001 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 NXNL2Q5VZ03 156 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 FSTL5Q8N475 847 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 GLB1L3Q8NCI6 653 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 LPGAT1Q92604 370 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SAMD11Q96NU1 681 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 MLPHQ9BV36 600 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 FAM96AQ9H5X1 160 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 XPR1Q9UBH6 696 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 TLK1Q9UKI8 766 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ISPDA4D126 451 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 KRT87PA6NCN2 255 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ABCB7O75027 752 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SERPINI2O75830 405 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 VAPBO95292 243 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PDGFAP04085 211 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
DFFB-202ENST00000339350 DDCP20711 480 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 MATKP42679 507 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PRAMEF19Q5SWL8 479 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 ARSKQ6UWY0 536 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PAGE2Q7Z2X7 111 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 CDH24Q86UP0 819 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 PGAM4Q8N0Y7 254 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 SPATA22Q8NHS9 363 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 RAET1EQ8TD07 263 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 CHAC2Q8WUX2 184 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 VWA7Q9Y334 891 aa12.48□□□□□ -0.41
DFFB-202ENST00000339350 IPPQ9Y573 584 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms