RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 KCNU1A8MYU2 1149 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TNPO2O14787 897 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 PMPCBO75439 489 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 CPB1P15086 417 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TYMPP19971 482 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TCN1P20061 433 aaPredicted RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 FASP25445 335 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 PSMD5Q16401 504 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 KDELC1Q6UW63 502 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 OR10T2Q8NGX3 314 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 SDCCAG3Q96C92 435 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TSPAN17Q96FV3 270 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 C1orf74Q96LT6 269 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 FUNDC2Q9BWH2 189 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 MUC3BQ9H195 1237 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 IGSF5Q9NSI5 407 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 VWA7Q9Y334 891 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 COPG1Q9Y678 874 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 RNF103-CHMP3A0A140T963 221 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 E9PAM4 449 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 SDHDO14521 159 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TNFRSF10BO14763 440 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 CCNKO75909 580 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 POLR2IP36954 125 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 EIF2DP41214 584 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 ADARB1P78563 741 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TUSC3Q13454 348 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 ZNF460Q14592 562 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 AGAP9Q5VTM2 703 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 GDF6Q6KF10 455 aaPredicted RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 SERINC5Q86VE9 423 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 TXNDC5Q8NBS9 432 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 FBXL20Q96IG2 436 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 PPP1R36Q96LQ0 422 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 CENPOQ9BU64 300 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 IRF2BPLQ9H1B7 796 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 POMKQ9H5K3 350 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 EML4Q9HC35 981 aaKnown RBP20.44■□□□□ 0.86
SPNS1-203ENST00000334536 ACSS2Q9NR19 701 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 OSER1Q9NX31 292 aa20.44■□□□□ 0.86
SPNS1-203ENST00000334536 PATJQ8NI35 1801 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 TEX51A0A1B0GUA7 166 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SHOXO15266 292 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 GABARAPO95166 117 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 PAPSS2O95340 614 aaPredicted RBP20.43■□□□□ 0.86
SPNS1-203ENST00000334536 RBP1P09455 135 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 CTSHP09668 335 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 NAT2P11245 290 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 IL10P22301 178 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 PGGT1BP53609 377 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 WNT3AP56704 352 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 GALK2Q01415 458 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SLC14A2Q15849 920 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 CYBRD1Q53TN4 286 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SCD5Q86SK9 330 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SPATA2LQ8IUW3 424 aaPredicted RBP20.43■□□□□ 0.86
SPNS1-203ENST00000334536 FAM156AQ8NDB6 213 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 MARVELD3Q96A59 401 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SUSD3Q96L08 255 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 OMDQ99983 421 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 PCDHAC1Q9H158 963 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 ATP13A1Q9HD20 1204 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 ZMAT5Q9UDW3 170 aaKnown RBP20.43■□□□□ 0.86
SPNS1-203ENST00000334536 GPSM3Q9Y4H4 160 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 E7ENX8 843 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SYNCRIPO60506 623 aaKnown RBP20.43■□□□□ 0.86
SPNS1-203ENST00000334536 CCDC159P0C7I6 412 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 ENPP1P22413 925 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 MLLT6P55198 1093 aaPredicted RBP20.43■□□□□ 0.86
SPNS1-203ENST00000334536 TAGLNQ01995 201 aaKnown RBP20.43■□□□□ 0.86
SPNS1-203ENST00000334536 CRY1Q16526 586 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 TECRLQ5HYJ1 363 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 UBE2UQ5VVX9 321 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 TMEM198Q66K66 360 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 FAM45BPQ6NSW5 357 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 ZNF544Q6NX49 715 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 PRSS48Q7RTY5 328 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 CLYBLQ8N0X4 340 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 RHOXF1Q8NHV9 184 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 FAM45AQ8TCE6 357 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 MUL1Q969V5 352 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SERPINB11Q96P15 392 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 VPS35Q96QK1 796 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 TMEM209Q96SK2 561 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 SFMBT1Q9UHJ3 866 aa20.43■□□□□ 0.86
SPNS1-203ENST00000334536 MYADML2A6NDP7 307 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 SNTNA6NMZ2 147 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 ZW10O43264 779 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 TMCC2O75069 709 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 TSPAN9O75954 239 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 POMCP01189 267 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 CD1EP15812 388 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 ALDH7A1P49419 539 aaKnown RBP20.42■□□□□ 0.86
SPNS1-203ENST00000334536 RENBPP51606 427 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 DSC3Q14574 896 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 CTF1Q16619 201 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 AGAP6Q5VW22 663 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 LYSMD2Q8IV50 215 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 SPARTQ8N0X7 666 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms