RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 OR6P1Q8NGX9 317 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 PATE1Q8WXA2 126 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 SLCO2A1Q92959 643 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
LIMS1-201ENST00000332345 SYNDIG1Q9H7V2 258 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 WASH6PQ9NQA3 447 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 PRDM8Q9NQV8 689 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 DNAJC16Q9Y2G8 782 aa13.79□□□□□ -0.2
LIMS1-201ENST00000332345 TPRP12270 2363 aaKnown RBP13.79□□□□□ -0.2
LIMS1-201ENST00000332345 BPTFQ12830 3046 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 TCRBV7S3A2A0A539 114 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 MAGEB16A2A368 324 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 TRABD2BA6NFA1 517 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 TMX2-CTNND1H3BSU7 103 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 CCDC188H7C350 402 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 PPM1DO15297 605 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 EML2O95834 649 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 RPLP0P05388 317 aaKnown RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 MLNP12872 115 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 FASLGP48023 281 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ARSDP51689 593 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 CTSCP53634 463 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 B4GALNT1Q00973 533 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ACVR1Q04771 509 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 DMPKQ09013 629 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 NR1D2Q14995 579 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 BCL7AQ4VC05 210 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 AGAP9Q5VTM2 703 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 AFTPHQ6ULP2 937 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ABRAXAS1Q6UWZ7 409 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 CERS6Q6ZMG9 384 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SYDE1Q6ZW31 735 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ZNF438Q7Z4V0 828 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SPRED1Q7Z699 444 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 PCGF5Q86SE9 256 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 C17orf53Q8N3J3 647 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 BEND7Q8N7W2 519 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SLC37A2Q8TED4 501 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 CPT1BQ92523 772 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 GATA6Q92908 595 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 LINC00615Q96LM1 132 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SLC38A3Q99624 504 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 XAB2Q9HCS7 855 aaKnown RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
LIMS1-201ENST00000332345 SLC2A6Q9UGQ3 507 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ASIC3Q9UHC3 531 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
LIMS1-201ENST00000332345 IGLV3-16A0A075B6K0 115 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 A6NCN8 305 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 TMEM8BA6NDV4 472 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 MGAT4DA6NG13 374 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 SDR42E2A6NKP2 422 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 F8W8V4 182 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 B4GAT1O43505 415 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CSO75390 466 aaKnown RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 GOT2P00505 430 aaKnown RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 XRCC1P18887 633 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 MGAT1P26572 445 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 RPL10P27635 214 aaKnown RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 HALP42357 657 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 NSG1P42857 185 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 OR1D5P58170 312 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CRADDP78560 199 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 HHEXQ03014 270 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CAMK2BQ13554 666 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 ITIH4Q14624 930 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CLPPQ16740 277 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 KCTD19Q17RG1 926 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 ISXQ2M1V0 245 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 FASTKD1Q53R41 847 aaKnown RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 METRNLQ641Q3 311 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 PIM3Q86V86 326 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 TRIM48Q8IWZ4 208 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 KLHL7Q8IXQ5 586 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 PPIL6Q8IXY8 311 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 PIANPQ8IYJ0 282 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 OR2L2Q8NH16 312 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 ZNF778Q96MU6 729 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CNTNAP3BQ96NU0 1288 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 KIFC1Q9BW19 673 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CNTNAP3Q9BZ76 1288 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 NRSN2Q9GZP1 204 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
LIMS1-201ENST00000332345 SAMD15Q9P1V8 674 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CPNE7Q9UBL6 633 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 PIKFYVEQ9Y2I7 2098 aa13.77□□□□□ -0.21
LIMS1-201ENST00000332345 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
LIMS1-201ENST00000332345 C17orf113A0A1B0GUU1 675 aa13.76□□□□□ -0.21
LIMS1-201ENST00000332345 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
LIMS1-201ENST00000332345 OR51F1A6NGY5 319 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms