RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 XYLT2Q9H1B5 865 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 FBRSQ9HAH7 460 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 FAM159BA6NKW6 160 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 H3BN98 237 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CLDN4O14493 209 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CYP7B1O75881 506 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 HNRNPLP14866 589 aaKnown RBP eCLIP11.3□□□□□ -0.64e-7■□□□□ 11.3
COL4A5-201ENST00000328300 SLC6A2P23975 617 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 KLF10Q13118 480 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 KCNC3Q14003 757 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CCNYL2Q5T2Q4 361 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 SCML4Q8N228 414 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 RAB7BQ96AH8 199 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 SFXN1Q9H9B4 322 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 PCDH12Q9NPG4 1184 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 ZDHHC18Q9NUE0 388 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 MYH3P11055 1940 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 DDX60Q8IY21 1712 aaKnown RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 GNSP15586 552 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CCDC142Q17RM4 750 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 MYLK3Q32MK0 819 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 ESRP1Q6NXG1 681 aaKnown RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 FBXW8Q8N3Y1 598 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 BTN2A2Q8WVV5 523 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 TRIB3Q96RU7 358 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 LPIN3Q9BQK8 851 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 C15orf41Q9Y2V0 281 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 A0A0J9YYE9 177 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 PNMA8CA0A1B0GUJ8 204 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 HLA-DQB2P05538 268 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 POM121L1PQ3SYA9 428 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 VPS26BQ4G0F5 336 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 PGAM4Q8N0Y7 254 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 SMG8Q8ND04 991 aaKnown RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CCM2Q9BSQ5 444 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 SHOX2O60902 331 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 OAZ2O95190 189 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 IQCF3P0C7M6 154 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF24P17028 368 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 GNAZP19086 355 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 LGALS3BPQ08380 585 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 TIFABQ6ZNK6 161 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 ADI1Q9BV57 179 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 PCCBP05166 539 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 IL1R2P27930 398 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 MPP1Q00013 466 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 PRKD1Q15139 912 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-201ENST00000328300 OR2T12Q8NG77 320 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 NECTIN4Q96NY8 510 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 TBC1D10AQ9BXI6 508 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 RIBC2Q9H4K1 309 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 GULP1Q9UBP9 304 aa11.3□□□□□ -0.6
COL4A5-201ENST00000328300 C4BPBP20851 252 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 EPHA3P29320 983 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 SLC1A5Q15758 541 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 SPATS1Q496A3 300 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 NIPAL1Q6NVV3 410 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TPRG1Q6ZUI0 275 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 ING5Q8WYH8 240 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 BTAF1O14981 1849 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 DHRS12A0PJE2 317 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TMEM189-UBE2V1I3L0A0 370 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 KERAO60938 352 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TULP3O75386 442 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 NUDT14O95848 222 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 CCNA2P20248 432 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 GSTM5P46439 218 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 RAB14P61106 215 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 BIKQ13323 160 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 GPAT3Q53EU6 434 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TMEM220Q6QAJ8 160 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 CYP2R1Q6VVX0 501 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 DENND1AQ8TEH3 1009 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 RCN3Q96D15 328 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 PPEF2O14830 753 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 KLF11O14901 512 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 CHRNA1P02708 482 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 PIK3CBP42338 1070 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 SLC1A2P43004 574 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 SF1Q15637 639 aaKnown RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 AMZ2Q86W34 360 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 LCN9Q8WX39 176 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms