RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 OSBPL6Q9BZF3 934 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 NANOGQ9H9S0 305 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 MAGEL2Q9UJ55 1249 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 PCDHB3Q9Y5E6 796 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 CHD5Q8TDI0 1954 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 A0A0J9YVX5 310 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 TRIM64BA6NI03 449 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 C9JVG2 144 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 BTN3A1O00481 513 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 EI24O14681 340 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 TULP3O75386 442 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 PIRTP0C851 137 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 UFM1P61960 85 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 ADARB1P78563 741 aaKnown RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 PRKG2Q13237 762 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 CRY1Q16526 586 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 PTPRNQ16849 979 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 C6orf136Q5SQH8 315 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 FKBP9P1Q75LS8 142 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 CLVS1Q8IUQ0 354 aaPredicted RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 PLGRKTQ9HBL7 147 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 UBA2Q9UBT2 640 aaPredicted RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 TRMT6Q9UJA5 497 aaKnown RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 NPEPPSL1A6NEC2 478 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 INSIG1O15503 277 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 KDELR3O43731 214 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 TPST1O60507 370 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 LPOP22079 712 aaPredicted RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 IL2P60568 153 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 ECT2LQ008S8 904 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 SMARCB1Q12824 385 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 FAM43BQ6ZT52 329 aaPredicted RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 GPSM1Q86YR5 675 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 AADATQ8N5Z0 425 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 KCNJ9Q92806 393 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 BIRC7Q96CA5 298 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 MYEOVQ96EZ4 313 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 CDK5RAP1Q96SZ6 601 aaKnown RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 CINPQ9BW66 212 aaPredicted RBP19.66■□□□□ 0.74
SOX2-201ENST00000325404 RNF208Q9H0X6 261 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 MUC3BQ9H195 1237 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 ST14Q9Y5Y6 855 aa19.66■□□□□ 0.74
SOX2-201ENST00000325404 BAIAP3O94812 1187 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 C1RP00736 705 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 PRSS56P0CW18 603 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 MTHFD1P11586 935 aaKnown RBP19.65■□□□□ 0.74
SOX2-201ENST00000325404 CDH1P12830 882 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 DCKP27707 260 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 CDH4P55283 916 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 CTXN3Q4LDR2 81 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 RIMKLAQ8IXN7 391 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 CYGBQ8WWM9 190 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 PDLIM5Q96HC4 596 aaKnown RBP19.65■□□□□ 0.74
SOX2-201ENST00000325404 PKD2L2Q9NZM6 624 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 OGDHLQ9ULD0 1010 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 LRFN2Q9ULH4 789 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 E2F3O00716 465 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 PRSS23O95084 383 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 PRLP01236 227 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 HMBSP08397 361 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 PRDX3P30048 256 aaKnown RBP19.65■□□□□ 0.74
SOX2-201ENST00000325404 RBBP7Q16576 425 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 AARS2Q5JTZ9 985 aaKnown RBP19.65■□□□□ 0.74
SOX2-201ENST00000325404 GALNT13Q8IUC8 556 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 LGI2Q8N0V4 545 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 ATAD1Q8NBU5 361 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 MDGA1Q8NFP4 955 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 PROKR1Q8TCW9 393 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 SLC30A3Q99726 388 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 BEGAINQ9BUH8 593 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 TDRD1Q9BXT4 1180 aaKnown RBP19.65■□□□□ 0.74
SOX2-201ENST00000325404 NUDT4Q9NZJ9 180 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 TMEM9Q9P0T7 183 aa19.65■□□□□ 0.74
SOX2-201ENST00000325404 H7C0S8 307 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 HRH2P25021 359 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 ATP6AP1LQ52LC2 224 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 CCNYL2Q5T2Q4 361 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 LRRC43Q8N309 656 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 OR2T11Q8NH01 316 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 C12orf43Q96C57 262 aaKnown RBP19.64■□□□□ 0.74
SOX2-201ENST00000325404 RMDN1Q96DB5 314 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 RPF2Q9H7B2 306 aaKnown RBP19.64■□□□□ 0.74
SOX2-201ENST00000325404 CXorf21Q9HAI6 301 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 GALPQ9UBC7 116 aa19.64■□□□□ 0.74
SOX2-201ENST00000325404 ACSL4O60488 711 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 CCL5P13501 91 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 VARSP26640 1264 aaKnown RBP19.64■□□□□ 0.73
SOX2-201ENST00000325404 AGTR2P50052 363 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 HLCSP50747 726 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 GRSF1Q12849 480 aaKnown RBP eCLIP19.64■□□□□ 0.73
SOX2-201ENST00000325404 TBC1D25Q3MII6 688 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 UGT3A1Q6NUS8 523 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 LYSMD3Q7Z3D4 306 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 CD200R1Q8TD46 325 aa19.64■□□□□ 0.73
SOX2-201ENST00000325404 TNPO3Q9Y5L0 923 aaKnown RBP19.64■□□□□ 0.73
SOX2-201ENST00000325404 A0A0D9SEW6 157 aa19.63■□□□□ 0.73
SOX2-201ENST00000325404 SYNCRIPO60506 623 aaKnown RBP19.63■□□□□ 0.73
SOX2-201ENST00000325404 IL12AP29459 219 aa19.63■□□□□ 0.73
SOX2-201ENST00000325404 RANBP1P43487 201 aa19.63■□□□□ 0.73
SOX2-201ENST00000325404 HK3P52790 923 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms