RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 AP3D1O14617 1153 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 SEPT4O43236 478 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 CST8O60676 142 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 PIGRP01833 764 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 ALOX12P18054 663 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 HTR1BP28222 390 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 CRHR1P34998 444 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 PRIM2P49643 509 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 MAPK12P53778 367 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 PSME3P61289 254 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 OTUD3Q5T2D3 398 aaPredicted RBP10.22□□□□□ -0.77
SF3B2-201ENST00000322535 ARMC4Q5T2S8 1044 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 ERAP2Q6P179 960 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 GK5Q6ZS86 529 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 CAMKK1Q8N5S9 505 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 TDRD5Q8NAT2 981 aaKnown RBP10.22□□□□□ -0.77
SF3B2-201ENST00000322535 OR7A2PQ8NGA2 310 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 OR4M1Q8NGD0 313 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 NELL2Q99435 816 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 C19orf43Q9BQ61 176 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 C9orf16Q9BUW7 83 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 MLPHQ9BV36 600 aaPredicted RBP10.22□□□□□ -0.77
SF3B2-201ENST00000322535 APOL5Q9BWW9 433 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 ALOXE3Q9BYJ1 711 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 IL1RL2Q9HB29 575 aa10.22□□□□□ -0.77
SF3B2-201ENST00000322535 I3L521 148 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 ZNF195O14628 629 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 MBL2P11226 248 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-201ENST00000322535 THPOP40225 353 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 GRSF1Q12849 480 aaKnown RBP eCLIP10.21□□□□□ -0.77
SF3B2-201ENST00000322535 PCLAFQ15004 111 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 LTB4RQ15722 352 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 DUOXA2Q1HG44 320 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 FUT11Q495W5 492 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 AASDHQ4L235 1098 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-201ENST00000322535 COLEC12Q5KU26 742 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 RTP2Q5QGT7 225 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 AGAP6Q5VW22 663 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 RAP1GAP2Q684P5 730 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 SCUBE3Q8IX30 993 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 MICU2Q8IYU8 434 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 RCOR2Q8IZ40 523 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 SLC22A15Q8IZD6 547 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 C1orf127Q8N9H9 656 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 OR52H1Q8NGJ2 320 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 ST6GAL2Q96JF0 529 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 AGAP4Q96P64 663 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 CGRRF1Q99675 332 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 SRRDQ9UH36 339 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 BAG5Q9UL15 447 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 MAGED2Q9UNF1 606 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-201ENST00000322535 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.77
SF3B2-201ENST00000322535 TP53BP1Q12888 1972 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-201ENST00000322535 CIB4A0PJX0 185 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 SSX4O60224 188 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 PPM1BO75688 479 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 ALDH1A1P00352 501 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 MYL4P12829 197 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 HOXD8P13378 290 aaPredicted RBP10.21□□□□□ -0.78
SF3B2-201ENST00000322535 IL7RP16871 459 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 PROZP22891 400 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 AKR1D1P51857 326 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 GALEQ14376 348 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 CCNJQ5T5M9 372 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 STEAP3Q658P3 488 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 C15orf39Q6ZRI6 1047 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 MILR1Q7Z6M3 343 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 KIF12Q96FN5 646 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 B3GALT6Q96L58 329 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.21□□□□□ -0.78
SF3B2-201ENST00000322535 GPN2Q9H9Y4 310 aaPredicted RBP10.21□□□□□ -0.78
SF3B2-201ENST00000322535 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 EGFL7Q9UHF1 273 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 IPO11Q9UI26 975 aaKnown RBP10.21□□□□□ -0.78
SF3B2-201ENST00000322535 TLK1Q9UKI8 766 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 EMCNQ9ULC0 261 aa10.21□□□□□ -0.78
SF3B2-201ENST00000322535 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.21□□□□□ -0.78
SF3B2-201ENST00000322535 C17orf113A0A1B0GUU1 675 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 HMX2A2RU54 273 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 SH3D21A4FU49 640 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 KRT87PA6NCN2 255 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 TPP1O14773 563 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 SEC14L2O76054 403 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 POP4O95707 220 aaKnown RBP10.2□□□□□ -0.78
SF3B2-201ENST00000322535 GSRP00390 522 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 ITGAVP06756 1048 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 CHRNGP07510 517 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 RFX1P22670 979 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 MPSTP25325 297 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 TGFBR1P36897 503 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 GABRB2P47870 512 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 SSTP61278 116 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 SNRPFP62306 86 aaKnown RBP10.2□□□□□ -0.78
SF3B2-201ENST00000322535 ILF2Q12905 390 aaKnown RBP10.2□□□□□ -0.78
SF3B2-201ENST00000322535 DGCR6Q14129 220 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 GRTP1Q5TC63 336 aa10.2□□□□□ -0.78
SF3B2-201ENST00000322535 LIN9Q5TKA1 542 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms