RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CPSF4O95639 269 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 FGFR1P11362 822 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TYMPP19971 482 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TUBP50607 506 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 VPS26BQ4G0F5 336 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TRMT11Q7Z4G4 463 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 VTCN1Q7Z7D3 282 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 ANKRD53Q8N9V6 530 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TAS1R2Q8TE23 839 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 FADS2P1A8MWK0 482 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 AVILO75366 819 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 UGT2B15P54855 530 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CARD16Q5EG05 197 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 WNT8BQ93098 351 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 RC3H2Q9HBD1 1191 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TTC34A8MYJ7 566 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CLEC3BP05452 202 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CMPK1P30085 196 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 FGL1Q08830 312 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 FAM189A2Q15884 450 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 PRAMEF17Q5VTA0 474 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 GPR139Q6DWJ6 353 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TBC1D21Q8IYX1 336 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 MANSC4A6NHS7 340 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-201ENST00000322507 RGS9O75916 674 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-201ENST00000322507 IL7P13232 177 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 LHCGRP22888 699 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM31Q5JXX7 168 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 TIMM29Q9BSF4 260 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF214Q9UL59 606 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-201ENST00000322507 UMPSP11172 480 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 LUMP51884 338 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ADAM8P78325 824 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 PMPCAQ10713 525 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 RPA4Q13156 261 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ESX1Q8N693 406 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 AHCYL2Q96HN2 611 aaKnown RBP9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF649Q9BS31 505 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 SPG21Q9NZD8 308 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 KCNS2Q9ULS6 477 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 HIF3AQ9Y2N7 669 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 DERAQ9Y315 318 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 FAM230AA0A1W2PPH8 454 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 GTF2F2P13984 249 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 PNLIPRP1P54315 467 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 AIMP2Q13155 320 aaKnown RBP9.65□□□□□ -0.87
COL12A1-201ENST00000322507 TMPRSS11AQ6ZMR5 421 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 ATG4CQ96DT6 458 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 DHRS1Q96LJ7 313 aa9.65□□□□□ -0.87
COL12A1-201ENST00000322507 TVP23AA6NH52 213 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SOX30O94993 753 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ATP5C1P36542 298 aaKnown RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM62Q0P6H9 643 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CRY1Q16526 586 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 FGD3Q5JSP0 725 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CERS2Q96G23 380 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ATP13A1Q9HD20 1204 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CFL2Q9Y281 166 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 E7ENX8 843 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM127O75204 238 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 STK17BO94768 372 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 POMCP01189 267 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 PPM1AP35813 382 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM44Q2T9K0 475 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 NEPROQ6NW34 567 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 COQ8AQ8NI60 647 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SENP6Q9GZR1 1112 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM39BQ9GZU3 492 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CCDC167Q9P0B6 97 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TRAF6Q9Y4K3 522 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 WDR27A2RRH5 827 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 OR6C70A6NIJ9 312 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ANGPTL7O43827 346 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 MITFO75030 526 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 LTFP02788 710 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 UGT2B10P36537 528 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 HUNKP57058 714 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 FAM131BQ86XD5 332 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF540Q8NDQ6 660 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ADAMTS13Q76LX8 1427 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 COL1A2P08123 1366 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 C20orf202A1L168 122 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ZMPSTE24O75844 475 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 PLATP00750 562 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 NR2F6P10588 404 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 GRIK4Q16099 956 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 GXYLT1Q4G148 440 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 FAM46CQ5VWP2 391 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 BRSK1Q8TDC3 778 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 AGAP11Q8TF27 550 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ANKRA2Q9H9E1 313 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms