RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PTGDR2Q9Y5Y4 395 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 PLXNA3P51805 1871 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 FXYD1O00168 92 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 AP3B1O00203 1094 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 GJB3O75712 270 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 KLKB1P03952 638 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 HLA-DQB2P05538 268 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 C7P10643 843 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 POU4F1Q01851 419 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 TRIM16LQ309B1 348 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 CCDC92Q53HC0 331 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 ZNF789Q5FWF6 425 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 CCNYL2Q5T2Q4 361 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 AGAP9Q5VTM2 703 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 SPRED2Q7Z698 418 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 PNPLA1Q8N8W4 532 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 ITPKCQ96DU7 683 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 TUBA1CQ9BQE3 449 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 CORO1BQ9BR76 489 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 TMEM106CQ9BVX2 250 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 OLA1Q9NTK5 396 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 NDUFAF1Q9Y375 327 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 V9GYQ6 96 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 CPNE6O95741 557 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 IGLV3-27P01718 113 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 NCK1P16333 377 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC6A2P23975 617 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 ACVRL1P37023 503 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 TMBIM6P55061 237 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 PRMT9Q6P2P2 845 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 LGI2Q8N0V4 545 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 HEPHQ9BQS7 1158 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 ZBED2Q9BTP6 218 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 FICDQ9BVA6 458 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 NANOGQ9H9S0 305 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 DNMT3LQ9UJW3 386 aa17.02■□□□□ 0.32
SCAMP4-201ENST00000316097 MATN3O15232 486 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 PMPCBO75439 489 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 CLPXO76031 633 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 FGF18O76093 207 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 LTA4HP09960 611 aaKnown RBP17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 FCGR1AP12314 374 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 SYN1P17600 705 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 SLC10A7Q0GE19 358 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 SEPT6Q14141 434 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 ZNF773Q6PK81 442 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 DNAJB7Q7Z6W7 309 aaPredicted RBP17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 MINDY1Q8N5J2 469 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 OR52K2Q8NGK3 314 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 SNX19Q92543 992 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 TAMM41Q96BW9 452 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.31
SCAMP4-201ENST00000316097 TSPAN3O60637 253 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 GPIP06744 558 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 LAG3P18627 525 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 OR1E1P30953 314 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 SGSHP51688 502 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 CDH13P55290 713 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 RPS24P62847 133 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 ZIK1Q3SY52 487 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 HECTD3Q5T447 861 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 AFMIDQ63HM1 303 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 USP51Q70EK9 711 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 TDRD1Q9BXT4 1180 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 MRPL17Q9NRX2 175 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 A0A0D9SEW6 157 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 LCHNA4D1U4 455 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 RHOQP17081 205 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 TACR2P21452 398 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 JAK1P23458 1154 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 ITKQ08881 620 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 PCSK7Q16549 785 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 GEN1Q17RS7 908 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 UGT3A2Q3SY77 523 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 TMCO5AQ8N6Q1 288 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 CNDP2Q96KP4 475 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 TSGA13Q96PP4 275 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 ZNF334Q9HCZ1 680 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 C8orf4Q9NR00 106 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 DAPK2Q9UIK4 370 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 C5orf42Q9H799 3197 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 PDE4DIPQ5VU43 2346 aa17.01■□□□□ 0.31
SCAMP4-201ENST00000316097 KRBA1A5PL33 1030 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 NRG2O14511 850 aaPredicted RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 RBP1P09455 135 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 CNPP09543 421 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 OTUD3Q5T2D3 398 aaPredicted RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 TMEM150AQ86TG1 271 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 MIER2Q8N344 545 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 GOLM1Q8NBJ4 401 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 DNAJB14Q8TBM8 379 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 PNPT1Q8TCS8 783 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 ANKRD49Q8WVL7 239 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 EXT2Q93063 718 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms