RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 LLGL1Q15334 1064 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 IGFBP7Q16270 282 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 LRRC38Q5VT99 294 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 AGAP9Q5VTM2 703 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 C6orf15Q6UXA7 325 aaPredicted RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 GALNT6Q8NCL4 622 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 C9orf43Q8TAL5 461 aaPredicted RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 APOBEC4Q8WW27 367 aaKnown RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 ELMO2Q96JJ3 720 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 VPS35Q96QK1 796 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 IL26Q9NPH9 171 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 LOC285095A0A1B0GVY8 99 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 RASSF9O75901 435 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 FURINP09958 794 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 IDSP22304 550 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 HMGCLP35914 325 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 DLSTP36957 453 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 CASRP41180 1078 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 MC1RQ01726 317 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 WASHC5Q12768 1159 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 CRTC2Q53ET0 693 aaPredicted RBP17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 CACHD1Q5VU97 1274 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 CCDC70Q6NSX1 233 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 KDELC1Q6UW63 502 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 FAM92BQ6ZTR7 304 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 TRAPPC5Q8IUR0 188 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 TTC30BQ8N4P2 665 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 KLHL6Q8WZ60 621 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 POT1Q9NUX5 634 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 CROTQ9UKG9 612 aa17.14■□□□□ 0.33
EXOSC4-201ENST00000316052 SEC16AO15027 2179 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 GPR39O43194 453 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A9O60656 530 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 KIAA0754O94854 1291 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 NDUFA10O95299 355 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 PECAM1P16284 738 aaPredicted RBP17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A6P19224 532 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 COMTP21964 271 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A1P22309 533 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A4P22310 534 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 CDKN2BP42772 138 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 CHRNA4P43681 627 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 CAPZBP47756 277 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 WNT3AP56704 352 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 PPP1CAP62136 330 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 ADCY2Q08462 1091 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 IL11RAQ14626 422 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 TAZQ16635 292 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 SIRPB2Q5JXA9 342 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 PRSS42Q7Z5A4 293 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 RASGRP3Q8IV61 690 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 RHOT2Q8IXI1 618 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 GDAP1Q8TB36 358 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 CXorf40BQ96DE9 158 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A7Q9HAW7 530 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A10Q9HAW8 530 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 UGT1A8Q9HAW9 530 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 FAM153AQ9UHL3 310 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 ANAPC2Q9UJX6 822 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 KCNMB2Q9Y691 235 aa17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 SPTAN1Q13813 2472 aaKnown RBP17.13■□□□□ 0.33
EXOSC4-201ENST00000316052 MED13Q9UHV7 2174 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 F5H423 210 aaPredicted RBP17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 K7EM74 188 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 CST8O60676 142 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 SPAG6O75602 509 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 TPM3P06753 285 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 FGF5P12034 268 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 NFKB1P19838 968 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 NR2C2P49116 596 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 CTSCP53634 463 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 FOXK1P85037 733 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 ERV3-1Q14264 604 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 CHRNA6Q15825 494 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 IRGCQ6NXR0 463 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 FAM83HQ6ZRV2 1179 aaPredicted RBP17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 RHOT1Q8IXI2 618 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 RBM12BQ8IXT5 1001 aaKnown RBP17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 SLC25A41Q8N5S1 370 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 RASGEF1AQ8N9B8 481 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 GPR150Q8NGU9 434 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 TFB1MQ8WVM0 346 aaKnown RBP17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 ZDHHC12Q96GR4 267 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 MRGPRX2Q96LB1 330 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 CCDC42Q96M95 316 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 ABHD10Q9NUJ1 306 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 ZNHIT6Q9NWK9 470 aaKnown RBP17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 DDX56Q9NY93 547 aaKnown RBP17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 IL17CQ9P0M4 197 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 EPHA6Q9UF33 1036 aa17.12■□□□□ 0.33
EXOSC4-201ENST00000316052 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 GAPDHSO14556 408 aaPredicted RBP17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 BUD23O43709 281 aaKnown RBP17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 TIAF1O95411 115 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 NELFEP18615 380 aaKnown RBP17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 SLC1A1P43005 524 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms