RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 BCL7BQ9BQE9 202 aa10.78□□□□□ -0.68
ZNF558-201ENST00000301475 ULBP1Q9BZM6 244 aa10.78□□□□□ -0.68
ZNF558-201ENST00000301475 OR12D3Q9UGF7 316 aa10.78□□□□□ -0.68
ZNF558-201ENST00000301475 TMA7Q9Y2S6 64 aaKnown RBP10.78□□□□□ -0.68
ZNF558-201ENST00000301475 PCDHGB1Q9Y5G3 927 aa10.78□□□□□ -0.68
ZNF558-201ENST00000301475 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
ZNF558-201ENST00000301475 SPO11Q9Y5K1 396 aa10.78□□□□□ -0.68
ZNF558-201ENST00000301475 LOC100130705A0A1B0GUX0 176 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 DYRK3O43781 588 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 HBP1O60381 514 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 DLGAP3O95886 979 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 GOT2P00505 430 aaKnown RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 HLA-DQB2P05538 268 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 CD1DP15813 335 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 CXCR2P25025 360 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 MZF1P28698 734 aaPredicted RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 PHC1P78364 1004 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 CHRNB3Q05901 458 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 ACOX1Q15067 660 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 ZBTB6Q15916 424 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 FAM98BQ52LJ0 330 aaKnown RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 SCIMPQ6UWF3 145 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 CLEC20AQ6ZU45 233 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 PAQR9Q6ZVX9 377 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 OSTM1Q86WC4 334 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 CILP2Q8IUL8 1156 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 LACC1Q8IV20 430 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 POC5Q8NA72 575 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 CHST13Q8NET6 341 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 FBXO30Q8TB52 745 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 FSD1LQ9BXM9 530 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 EMILIN2Q9BXX0 1053 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 DUSP16Q9BY84 665 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 MARCH4Q9P2E8 410 aaPredicted RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 PNMA8BQ9ULN7 279 aaPredicted RBP10.77□□□□□ -0.68
ZNF558-201ENST00000301475 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.68
ZNF558-201ENST00000301475 OR51F1A6NGY5 319 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 USP2O75604 605 aaPredicted RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 ANXA9O76027 345 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 KRT75O95678 551 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 SLC4A1P02730 911 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 ANXA6P08133 673 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 INSRRP14616 1297 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 NPR3P17342 541 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 POLR2JP52435 117 aaKnown RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 ARPC4P59998 168 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 PCSK7Q16549 785 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 KYAT1Q16773 422 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 COLEC12Q5KU26 742 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 FBXO47Q5MNV8 452 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 DESI1Q6ICB0 168 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 RANBP10Q6VN20 620 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 CCDC81Q6ZN84 652 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 CCDC117Q8IWD4 279 aaPredicted RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 B3GALNT2Q8NCR0 500 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 FAM83FQ8NEG4 500 aaPredicted RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 SYT17Q9BSW7 474 aa10.77□□□□□ -0.69
ZNF558-201ENST00000301475 MOV10Q9HCE1 1003 aaKnown RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 SEMA4BQ9NPR2 832 aaPredicted RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 NYNRINQ9P2P1 1898 aaKnown RBP10.77□□□□□ -0.69
ZNF558-201ENST00000301475 SYCE1LA8MT33 242 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 HS6ST1O60243 411 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 SLC22A3O75751 556 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CST1P01037 141 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 NTRK1P04629 796 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CCDC159P0C7I6 412 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 PSMB9P28065 219 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 FMO3P31513 532 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ARSDP51689 593 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 AIF1P55008 147 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CDK5R2Q13319 367 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TOP3AQ13472 1001 aaPredicted RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 RAPSNQ13702 412 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 DLEU7Q6UYE1 221 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TAS2R42Q7RTR8 314 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 GPRIN1Q7Z2K8 1008 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 HID1Q8IV36 788 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ARHGAP12Q8IWW6 846 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 OR2T11Q8NH01 316 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 COLEC11Q9BWP8 271 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 BRINP2Q9C0B6 783 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TKTL2Q9H0I9 626 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 USE1Q9NZ43 259 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 NEU3Q9UQ49 428 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CRYL1Q9Y2S2 319 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 SOCS7O14512 581 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 PRMT5O14744 637 aaPredicted RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 HOXC11O43248 304 aaPredicted RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ANGPTL1O95841 491 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 GGT1P19440 569 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 GRK3P35626 688 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TIAL1Q01085 375 aaKnown RBP eCLIP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CLCA4Q14CN2 919 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 UBE2UQ5VVX9 321 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 B3GNT8Q7Z7M8 397 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 LINC01465Q8N7H1 131 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CALML6Q8TD86 181 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms