RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 RNF34Q969K3 372 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 MUL1Q969V5 352 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 NEDD4LQ96PU5 975 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 KLK14Q9P0G3 267 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 ANKRD6Q9Y2G4 727 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 C1RP00736 705 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 ALPLP05186 524 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
HERC6-202ENST00000273960 HRH2P25021 359 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 BNIP2Q12982 314 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 TUBA3CQ13748 450 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 LCLAT1Q6UWP7 414 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.71□□□□□ -0.37
HERC6-202ENST00000273960 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 TRIM48Q8IWZ4 208 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 RHOXF1Q8NHV9 184 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 C12orf42Q96LP6 360 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 HOPXQ9BPY8 73 aaPredicted RBP12.71□□□□□ -0.37
HERC6-202ENST00000273960 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 CARS2Q9HA77 564 aaKnown RBP12.71□□□□□ -0.37
HERC6-202ENST00000273960 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.37
HERC6-202ENST00000273960 PDHXO00330 501 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 PRMT5O14744 637 aaPredicted RBP12.71□□□□□ -0.38
HERC6-202ENST00000273960 NPHS1O60500 1241 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 IQCF3P0C7M6 154 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 SIGIRRQ6IA17 410 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 FAM20CQ8IXL6 584 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 ROPN1LQ96C74 230 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 ZNF717Q9BY31 904 aaPredicted RBP12.71□□□□□ -0.38
HERC6-202ENST00000273960 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 CPA4Q9UI42 421 aa12.71□□□□□ -0.38
HERC6-202ENST00000273960 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 FAM20BO75063 409 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 APOA1P02647 267 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 LMO2P25791 158 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 EIF2DP41214 584 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 HTR2BP41595 481 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 HK2P52789 917 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 IER5Q5VY09 327 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 DTWD1Q8N5C7 304 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 EDEM1Q92611 657 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 HDAC2Q92769 488 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 FAM167AQ96KS9 214 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 FYTTD1Q96QD9 318 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 GPR20Q99678 358 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 GMIPQ9P107 970 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TEKT2Q9UIF3 430 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 SARDHQ9UL12 918 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 ANGPTL3Q9Y5C1 460 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 QSER1Q2KHR3 1735 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 LOC100130705A0A1B0GUX0 176 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TRIM64A6NGJ6 449 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 ASB14A6NK59 587 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 C12orf71A8MTZ7 269 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PSMD8P48556 350 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 ST13P50502 369 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 PTPRCAPQ14761 206 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TMEM132DQ14C87 1099 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 AGAP9Q5VTM2 703 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TTC23Q5W5X9 447 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TFAP2DQ7Z6R9 452 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PYCR2Q96C36 320 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TXNDC15Q96J42 360 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 CDK15Q96Q40 435 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 FSD1LQ9BXM9 530 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PDZD7Q9H5P4 517 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PRM3Q9NNZ6 103 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 MAT2BQ9NZL9 334 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PRDX3P30048 256 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 S100A5P33763 92 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 CLCNKBP51801 687 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 CDH17Q12864 832 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 TBRG1Q3YBR2 411 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 FAM98BQ52LJ0 330 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 GALNT10Q86SR1 603 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 GOLM1Q8NBJ4 401 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 PCNPQ8WW12 178 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 Q96MT0 163 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 NUAK2Q9H093 628 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 ABCG8Q9H221 673 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 GSTO2Q9H4Y5 243 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 MOV10Q9HCE1 1003 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 UCKL1Q9NWZ5 548 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 ERAP1Q9NZ08 941 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 FBXO10Q9UK96 956 aa12.7□□□□□ -0.38
HERC6-202ENST00000273960 OAS3Q9Y6K5 1087 aaKnown RBP12.7□□□□□ -0.38
HERC6-202ENST00000273960 A0A1W2PQ72 361 aa12.69□□□□□ -0.38
HERC6-202ENST00000273960 RBP1P09455 135 aa12.69□□□□□ -0.38
HERC6-202ENST00000273960 JUNBP17275 347 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms