RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 KLHL1Q9NR64 748 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 SAMD4AQ9UPU9 718 aaKnown RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 ERVW-1Q9UQF0 538 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 LOC100506127A0A0U1RQW1 187 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 TTC24A2A3L6 582 aaPredicted RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 SLC28A2O43868 658 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 CAPN15O75808 1086 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 CHRNGP07510 517 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 BUD31P41223 144 aaPredicted RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 SEMG2Q02383 582 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 CCNYL2Q5T2Q4 361 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 ZNF540Q8NDQ6 660 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 VRTNQ9H8Y1 702 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 TEX264Q9Y6I9 313 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 CAPN8A6NHC0 703 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 ANXA4P09525 319 aaPredicted RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 ACVRL1P37023 503 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 GSTM5P46439 218 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 LRRC73Q5JTD7 316 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 SPANXN2Q5MJ10 180 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 REP15Q6BDI9 236 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PAOXQ6QHF9 649 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 OR52L1Q8NGH7 329 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PNPT1Q8TCS8 783 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 MCMBPQ9BTE3 642 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 TDRD1Q9BXT4 1180 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 CLN6Q9NWW5 311 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 U3KQV3 271 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PHRF1Q9P1Y6 1649 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 OR6A2O95222 327 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 ZNF37AP17032 561 aaPredicted RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 SLC11A1P49279 550 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 LIPEQ05469 1076 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 GPR17Q13304 367 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 ATP1A4Q13733 1029 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 TXNDC8Q6A555 127 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 CIB1Q99828 191 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 EBF4Q9BQW3 602 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 C11orf84Q9BUA3 381 aaPredicted RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 FNDC11Q9BVV2 318 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 CADM1Q9BY67 442 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 GPR88Q9GZN0 384 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PNPLA8Q9NP80 782 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 ATP6V1HQ9UI12 483 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PCCBP05166 539 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 GALNT2Q10471 571 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 BIKQ13323 160 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 MAPK11Q15759 364 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PLEKHG4Q58EX7 1191 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 TMEM220Q6QAJ8 160 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 DEF8Q6ZN54 512 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 CDKN2AIPNLQ96HQ2 116 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 CYP2S1Q96SQ9 504 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 AP3D1O14617 1153 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 CCNDBP1O95273 360 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 HOXB6P17509 224 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 NELFEP18615 380 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 ZNF132P52740 706 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 LPIN1Q14693 890 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 C1orf220Q5T0J3 134 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 FAM47BQ8NA70 645 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 ZNF483Q8TF39 744 aaPredicted RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 DEPDC7Q96QD5 511 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 SERHL2Q9H4I8 314 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 TFB2MQ9H5Q4 396 aaKnown RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 SERHLQ9NQF3 203 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 CCDC177Q9NQR7 707 aaPredicted RBP13.85□□□□□ -0.19
CDH3-201ENST00000264012 STMN3Q9NZ72 180 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 POLR1DQ9Y2S0 133 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 TELO2Q9Y4R8 837 aa13.85□□□□□ -0.19
CDH3-201ENST00000264012 PNMA8CA0A1B0GUJ8 204 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 CCR3P51677 355 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 UGT2B15P54855 530 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 SIRPB2Q5JXA9 342 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 TRAF7Q6Q0C0 670 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 PAQR3Q6TCH7 311 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 SNX20Q7Z614 316 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 PHC3Q8NDX5 983 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 C10orf82Q8WW14 230 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 CRYGNQ8WXF5 182 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 NUSAP1Q9BXS6 441 aaKnown RBP13.84□□□□□ -0.19
CDH3-201ENST00000264012 ZMYND8Q9ULU4 1186 aaPredicted RBP13.84□□□□□ -0.19
CDH3-201ENST00000264012 MFHAS1Q9Y4C4 1052 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 G3V2T6 193 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 C8GP07360 202 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 ADARP55265 1226 aaKnown RBP13.84□□□□□ -0.19
CDH3-201ENST00000264012 DPYSQ14117 519 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 MED27Q6P2C8 311 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 PARGQ86W56 976 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 Q96MT0 163 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 KLHL25Q9H0H3 589 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 C3orf14Q9HBI5 128 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 DAPK2Q9UIK4 370 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 ADAMTSL3P82987 1691 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 ITGA1P56199 1179 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 ERVK-21P61565 698 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms