RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SNX20Q7Z614 316 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 IZUMO1Q8IYV9 350 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 SLC43A3Q8NBI5 491 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 SLC35B2Q8TB61 432 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 RASSF5Q8WWW0 418 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 TLCD1Q96CP7 247 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 POLMQ9NP87 494 aaPredicted RBP18.78■□□□□ 0.6
PTPRE-201ENST00000254667 GRHL1Q9NZI5 618 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 COQ6Q9Y2Z9 468 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 CLDN4O14493 209 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 RASGRP1O95267 797 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 LARS2Q15031 903 aaKnown RBP18.78■□□□□ 0.6
PTPRE-201ENST00000254667 UNC5BQ8IZJ1 945 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 CLEC4CQ8WTT0 213 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 ROPN1LQ96C74 230 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 RAB11FIP5Q9BXF6 653 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 BCO2Q9BYV7 579 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 CD84Q9UIB8 345 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 ELOVL7A1L3X0 281 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 SLC35G6P0C7Q6 338 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 GRSF1Q12849 480 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTPRE-201ENST00000254667 KRT77Q7Z794 578 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 TMC8Q8IU68 726 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 SLCO2A1Q92959 643 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 GEMIN8Q9NWZ8 242 aaKnown RBP18.78■□□□□ 0.6
PTPRE-201ENST00000254667 YIPF1Q9Y548 306 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 KRT33AO76009 404 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 ITGAXP20702 1163 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 TMEM220Q6QAJ8 160 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 IKBIPQ70UQ0 350 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF572Q7Z3I7 529 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 EEF1AKMT1Q8WVE0 214 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 PCDHGA11Q9Y5H2 935 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF536O15090 1300 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 PSMD4P55036 377 aaKnown RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 SP2Q02086 613 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 DCTN2Q13561 401 aaKnown RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 MAPK11Q15759 364 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 ARMC3Q5W041 872 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 PTCHD4Q6ZW05 846 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 DNAJB7Q7Z6W7 309 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 PPM1MQ96MI6 270 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 TFB2MQ9H5Q4 396 aaKnown RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 ABCB8Q9NUT2 735 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 EHD3Q9NZN3 535 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 HMGXB4Q9UGU5 601 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 FAM86C2PA6NEL3 165 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 MAPK12P53778 367 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 ACTR3P61158 418 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 QPCTQ16769 361 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 FAAH2Q6GMR7 532 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 PRR23CQ6ZRP0 262 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 CXXC5Q7LFL8 322 aaKnown RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 TMEM192Q8IY95 271 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 SAMD14Q8IZD0 417 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 GLB1L3Q8NCI6 653 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 LCN9Q8WX39 176 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 GATA5Q9BWX5 397 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-201ENST00000254667 S100A14Q9HCY8 104 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 INSL6Q9Y581 213 aa18.77■□□□□ 0.6
PTPRE-201ENST00000254667 MCIDASD6RGH6 385 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 SCN2BO60939 215 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 MYL9P24844 172 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 HSD17B2P37059 387 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 GDF10P55107 478 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 STXBP1P61764 594 aaKnown RBP18.77■□□□□ 0.59
PTPRE-201ENST00000254667 CYP4F8P98187 520 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 TAF8Q7Z7C8 310 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 AP3S1Q92572 193 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 HSD3B7Q9H2F3 369 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 CRISPLD1Q9H336 500 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 EPB41L1Q9H4G0 881 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 TMEM27Q9HBJ8 222 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 POLR3BQ9NW08 1133 aaPredicted RBP18.77■□□□□ 0.59
PTPRE-201ENST00000254667 CALML5Q9NZT1 146 aa18.77■□□□□ 0.59
PTPRE-201ENST00000254667 KERAO60938 352 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 SCELO95171 688 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 RCVRNP35243 200 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 OLR1P78380 273 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 TLE2Q04725 743 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 VITQ6UXI7 678 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 SCLYQ96I15 445 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 UNC93B1Q9H1C4 597 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 NFKBIL1Q9UBC1 381 aaPredicted RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 SLC22A2O15244 555 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 MAPK10P53779 464 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 UBXN11Q5T124 520 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 GDF6Q6KF10 455 aaPredicted RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 FSTL5Q8N475 847 aaPredicted RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 BANPQ8N9N5 519 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 C11orf65Q8NCR3 313 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 SH3RF2Q8TEC5 729 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 CDH22Q9UJ99 828 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 PI15O43692 258 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 LACTB2Q53H82 288 aaPredicted RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 PEG10Q86TG7 708 aaKnown RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 CPNE9Q8IYJ1 553 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 DNAJB8Q8NHS0 232 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 BRINP2Q9C0B6 783 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 MRPL39Q9NYK5 338 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms