RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 GABRB3P28472 473 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 PMLP29590 882 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 DMPKQ09013 629 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 SPEM2Q0P670 501 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 CTBP1Q13363 440 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 NAA30Q147X3 362 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 CCDC6Q16204 474 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 UBAP2Q5T6F2 1119 aaKnown RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 DOK6Q6PKX4 331 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 MARK2Q7KZI7 788 aaKnown RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 LDB1Q86U70 411 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 GALNT13Q8IUC8 556 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 FSTL5Q8N475 847 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 PNPLA1Q8N8W4 532 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 MYRIPQ8NFW9 859 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 GPBAR1Q8TDU6 330 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 FBF1Q8TES7 1133 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 CDKL2Q92772 493 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 OR2M4Q96R27 311 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 LRRC61Q9BV99 259 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 SLC13A1Q9BZW2 595 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 CLPBQ9H078 707 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 EPB41L4BQ9H329 900 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 CARS2Q9HA77 564 aaKnown RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 CYP4F12Q9HCS2 524 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 SMYD2Q9NRG4 433 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 DNAJC28Q9NX36 388 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 RAPGEFL1Q9UHV5 662 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 RABGEF1Q9UJ41 708 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 CORO1CQ9ULV4 474 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 PCDHGB2Q9Y5G2 931 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 COMMD10Q9Y6G5 202 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 CSNK1G3Q9Y6M4 447 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 DNAH14Q0VDD8 3507 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 TP53BP1Q12888 1972 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 F8W8V4 182 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 H3BMM5 538 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 PIAS2O75928 621 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 AHSGP02765 367 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 OR56A5P0C7T3 313 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 CD9P21926 228 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 CCT8P50990 548 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 SF3A2Q15428 464 aaKnown RBP13.9□□□□□ -0.18
VPS25-201ENST00000253794 KBTBD12Q3ZCT8 623 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 ZNF789Q5FWF6 425 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 TMEM220Q6QAJ8 160 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 DBX2Q6ZNG2 339 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 PRR23CQ6ZRP0 262 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 CAPN12Q6ZSI9 719 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 HID1Q8IV36 788 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 MREGQ8N565 214 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 CLDN19Q8N6F1 224 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 OTUD6BQ8N6M0 293 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 SAP25Q8TEE9 199 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 SGF29Q96ES7 293 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 CYTH2Q99418 400 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 TCEAL2Q9H3H9 227 aaPredicted RBP13.9□□□□□ -0.18
VPS25-201ENST00000253794 GAREM1Q9H706 876 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 VPS37BQ9H9H4 285 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 FSCN3Q9NQT6 498 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 SPASTQ9UBP0 616 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 GNPTGQ9UJJ9 305 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 PRSS21Q9Y6M0 314 aa13.9□□□□□ -0.18
VPS25-201ENST00000253794 RIF1Q5UIP0 2472 aaKnown RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 A0A087WUV0 522 aaPredicted RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 CXorf49A8MYA2 514 aaPredicted RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 CDX4O14627 284 aaPredicted RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 HAUS5O94927 633 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 ACSL3O95573 720 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 GNPDA1P46926 289 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 CD151P48509 253 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 CSE1LP55060 971 aaKnown RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 MPP1Q00013 466 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 SLC14A1Q13336 389 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 ELOCQ15369 112 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 CTSL3PQ5NE16 218 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 XKR5Q6UX68 686 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 NRROSQ86YC3 692 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 TRAPPC5Q8IUR0 188 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 MINDY1Q8N5J2 469 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 ZNF548Q8NEK5 533 aaPredicted RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 CPNE1Q99829 537 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 TMEM168Q9H0V1 697 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 IL21RQ9HBE5 538 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 PPANQ9NQ55 473 aaKnown RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 FBXO6Q9NRD1 293 aaPredicted RBP13.89□□□□□ -0.19
VPS25-201ENST00000253794 LATS2Q9NRM7 1088 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 GULP1Q9UBP9 304 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 FETUBQ9UGM5 382 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 PSAT1Q9Y617 370 aa13.89□□□□□ -0.19
VPS25-201ENST00000253794 CCDC151A5D8V7 595 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 MGAT4DA6NG13 374 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms