RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SCHIP1Q9P0W5 487 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-201ENST00000242776 CHKBQ9Y259 395 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 SLC30A1Q9Y6M5 507 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 MN1Q10571 1320 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-201ENST00000242776 ARGFXA6NJG6 315 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 FADS2P1A8MWK0 482 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 KIF2AO00139 706 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-201ENST00000242776 SPAG6O75602 509 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 UBXN7O94888 489 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 TUBB4AP04350 444 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 TNNT1P13805 278 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 CTNNA2P26232 953 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 HSPA9P38646 679 aaKnown RBP13.59□□□□□ -0.23
DDX39A-201ENST00000242776 STC1P52823 247 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 MARC1Q5VT66 337 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 TMCO3Q6UWJ1 677 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 NDUFAF2Q8N183 169 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 SLC25A23Q9BV35 468 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 ZWILCHQ9H900 591 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 AKIRIN1Q9H9L7 192 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-201ENST00000242776 PADI1Q9ULC6 663 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 CNOT6Q9ULM6 557 aaKnown RBP13.59□□□□□ -0.23
DDX39A-201ENST00000242776 DNAJC16Q9Y2G8 782 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 MAP4K5Q9Y4K4 846 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 HYOU1Q9Y4L1 999 aa13.59□□□□□ -0.23
DDX39A-201ENST00000242776 HIVEP3Q5T1R4 2406 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 KIR2DS5A0A0G2JLQ3 304 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 A0A0G2JNG1 304 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 A0A0J9YYE9 177 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 TCP11X1B4DZS4 312 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 H3BRJ5 948 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 KIR2DS3K7RE56 304 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 GRID2O43424 1007 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 VIPP01282 170 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 TRBC1P01850 177 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 ANKRD34CP0C6C1 535 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 SLC2A4P14672 509 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 CTNNA1P35221 906 aaKnown RBP13.58□□□□□ -0.24
DDX39A-201ENST00000242776 DCTP40126 519 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF135P52742 658 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-201ENST00000242776 TAS2R40P59535 323 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 DSC2Q02487 901 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 KCNAB1Q14722 419 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 KIR2DS5Q14953 304 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 CACHD1Q5VU97 1274 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 IRGCQ6NXR0 463 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 PHYKPLQ8IUZ5 450 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 LPCAT1Q8NF37 534 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 LRRN4Q8WUT4 740 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 RSC1A1Q92681 617 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 WDR24Q96S15 920 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 ACSS2Q9NR19 701 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 SRPK3Q9UPE1 567 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 CRYBG3Q68DQ2 2970 aa13.58□□□□□ -0.24
DDX39A-201ENST00000242776 LILRA5A6NI73 299 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 PDZK1P1A8MUH7 402 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 CLDN1O95832 211 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 SLC4A1P02730 911 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 C9P02748 559 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 KRT1P04264 644 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 TCF4P15884 667 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF8P17098 575 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 IL1R2P27930 398 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 ARL4AP40617 200 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 CETN2P41208 172 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 UBE2IP63279 158 aaKnown RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 KRT81Q14533 505 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 RPS6KA1Q15418 735 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 INPP5JQ15735 1006 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 ALS2CLQ60I27 953 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF765Q7L2R6 523 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 PPP1R3BQ86XI6 285 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 CPNE8Q86YQ8 564 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 MAP7D3Q8IWC1 876 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 SRRM1Q8IYB3 904 aaKnown RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 RBM41Q96IZ5 413 aaKnown RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 C16orf45Q96MC5 204 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 OR2AG1Q9H205 316 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 LHX9Q9NQ69 397 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX39A-201ENST00000242776 VPS18Q9P253 973 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 ATXN10Q9UBB4 475 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 PPIL1Q9Y3C6 166 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 PCDHA3Q9Y5H8 950 aa13.57□□□□□ -0.24
DDX39A-201ENST00000242776 PRRC2CQ9Y520 2896 aaKnown RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 PYGLP06737 847 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 RARAP10276 462 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 RWDD2BP57060 319 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 PPP1CAP62136 330 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 ETF1P62495 437 aaKnown RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 IHHQ14623 411 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 IL11RAQ14626 422 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 PDK2Q15119 407 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 INSCQ1MX18 579 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms