RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ITM2AO43736 263 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CDH5P33151 784 aaPredicted RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 VSTM1Q6UX27 236 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 PRR23CQ6ZRP0 262 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 RGL4Q8IZJ4 473 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CEP295NLQ96MC4 621 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CXorf21Q9HAI6 301 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 TELO2Q9Y4R8 837 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 PCDHB1Q9Y5F3 818 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 URADA6NGE7 173 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 MCIDASD6RGH6 385 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 TOP3BO95985 862 aaKnown RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 MTPNP58546 118 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 DQX1Q8TE96 717 aaKnown RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.29
NEK4-201ENST00000233027 PCDHAC1Q9H158 963 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 BCAS3Q9H6U6 928 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 NUDT4Q9NZJ9 180 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 OR2AG2A6NM03 316 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 ENPP3O14638 875 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 FGBP02675 491 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 PPP2R2BQ00005 443 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 PCDHGC4Q9Y5F7 938 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 STBD1O95210 358 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 UGT2B4P06133 528 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 TACR2P21452 398 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 LMO2P25791 158 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CTNNB1P35222 781 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 NAE1Q13564 534 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 ZBTB6Q15916 424 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 SLC9A4Q6AI14 798 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 NEK5Q6P3R8 708 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 TAC4Q86UU9 113 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 P2RY8Q86VZ1 359 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 ZNF433Q8N7K0 673 aaPredicted RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 HM13Q8TCT9 377 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 TTLL2Q9BWV7 592 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 FAM240BA0A1B0GVZ2 78 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 CDH12P55289 794 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 LCP2Q13094 533 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 RBM23Q86U06 439 aaKnown RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 RAB43Q86YS6 212 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 MEIOBQ8N635 442 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 KAT2AQ92830 837 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 BRINP2Q9C0B6 783 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 IFT80Q9P2H3 777 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 C2CD4BA6NLJ0 364 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 PRAMEF1O95521 474 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 MTHFD1P11586 935 aaKnown RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 MYCLP1P12525 358 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 NRLP54845 237 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 ENPEPQ07075 957 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 PCDH1Q08174 1060 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 PTF1AQ7RTS3 328 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 C17orf64Q86WR6 236 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 C11orf24Q96F05 449 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 NODALQ96S42 347 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 PIGUQ9H490 435 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 ARL5AQ9Y689 179 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 GRIN2DO15399 1336 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 STK16O75716 305 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 RGS20O76081 388 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 NDST3O95803 873 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 CHRM5P08912 532 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 ANXA4P09525 319 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 SDC2P34741 201 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 UGT1A5P35504 534 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 SPAM1P38567 509 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 RPIAP49247 311 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 TTC29Q8NA56 475 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 MUC13Q9H3R2 512 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 C8orf4Q9NR00 106 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 ZNF358Q9NW07 568 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 CLDN11O75508 207 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 SEMA3DO95025 777 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 SAGP10523 405 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 SLC1A2P43004 574 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 CASP9P55211 416 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 ECT2LQ008S8 904 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 TSTD2Q5T7W7 516 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 METTL21CQ5VZV1 264 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 METTL3Q86U44 580 aaKnown RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 OR7D4Q8NG98 312 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 AP2M1Q96CW1 435 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 TRNT1Q96Q11 434 aaKnown RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 GFM1Q96RP9 751 aaKnown RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 MIR1-1HGQ9H1L0 117 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 C3orf14Q9HBI5 128 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 TREHO43280 583 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 AIREO43918 545 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 FMO3P31513 532 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 ADAM17P78536 824 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms