RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ASPSCR1Q9BZE9 553 aa14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 OR2B2Q9GZK3 357 aa14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 GLOD4Q9HC38 313 aa14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 RGS18Q9NS28 235 aa14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 MARCH4Q9P2E8 410 aaPredicted RBP14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 ENPP5Q9UJA9 477 aa14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 FBXW11Q9UKB1 542 aa14.03□□□□□ -0.16
PCDHB3-201ENST00000231130 TFECO14948 347 aaPredicted RBP14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 NCAM2O15394 837 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 HLA-DQB2P05538 268 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 PRDX3P30048 256 aaKnown RBP14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 GGT5P36269 586 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 ZNF678Q5SXM1 525 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 RAP1GAP2Q684P5 730 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 SPARTQ8N0X7 666 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 CRYBG2Q8N1P7 616 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 RORBQ92753 470 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 TMBIM1Q969X1 311 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 ROPN1LQ96C74 230 aa14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 HOPXQ9BPY8 73 aaPredicted RBP14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 NUP214P35658 2090 aaPredicted RBP14.02□□□□□ -0.16
PCDHB3-201ENST00000231130 H3BRB1 525 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 PRSS56P0CW18 603 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 IMPDH1P20839 514 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 EDNRBP24530 442 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 ARSDP51689 593 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 WNT3AP56704 352 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 CRY1Q16526 586 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 AAK1Q2M2I8 961 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 GLYATQ6IB77 296 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 RIOX2Q8IUF8 465 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 C8orf59Q8N0T1 100 aaPredicted RBP14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 TXNDC15Q96J42 360 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 MAP6Q96JE9 813 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 NSMCE2Q96MF7 247 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 PRDM8Q9NQV8 689 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 ENTPD7Q9NQZ7 604 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 SARDHQ9UL12 918 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 C12orf71A8MTZ7 269 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 SOCS7O14512 581 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 CDK2AP1O14519 115 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 XPNPEP2O43895 674 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 KCNK2O95069 426 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 LBPP18428 481 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 HOXA11P31270 313 aaPredicted RBP14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 CCR1P32246 355 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 PTGS2P35354 604 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 ADCYAP1R1P41586 468 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 PSMD8P48556 350 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 NRG1Q02297 640 aaPredicted RBP14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 LAPTM4AQ15012 233 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 SNX17Q15036 470 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 DENND5AQ6IQ26 1287 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 SPESP1Q6UW49 350 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 PAQR9Q6ZVX9 377 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 PACRGLQ8N7B6 248 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 C2CD4AQ8NCU7 369 aaPredicted RBP14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 TRIM63Q969Q1 353 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 CCDC126Q96EE4 140 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 BDH2Q9BUT1 245 aa14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 UBQLN1Q9UMX0 589 aaKnown RBP14.02□□□□□ -0.17
PCDHB3-201ENST00000231130 CCDC154A6NI56 674 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 ENPP3O14638 875 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 ANXA9O76027 345 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 CNTN5O94779 1100 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 TPPPO94811 219 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 SEMA3DO95025 777 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 DBTP11182 482 aaKnown RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 AXLP30530 894 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 TGFBR1P36897 503 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 PSMD5Q16401 504 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 PXDC1Q5TGL8 231 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 THAP5Q7Z6K1 395 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 RAB44Q7Z6P3 723 aaPredicted RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 FAM83FQ8NEG4 500 aaPredicted RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 PNPT1Q8TCS8 783 aaKnown RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 BLOC1S5Q8TDH9 187 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 HCAR2Q8TDS4 363 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 ZUFSPQ96AP4 578 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC39A8Q9C0K1 460 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 POLG2Q9UHN1 485 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 COMMD10Q9Y6G5 202 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 HTR2BP41595 481 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 CD86P42081 329 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 OR2B6P58173 313 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 LILRA4P59901 499 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 FOXD4Q12950 439 aaPredicted RBP14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC27A1Q6PCB7 646 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 ISCA2Q86U28 154 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 TBATAQ96M53 351 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 CDK15Q96Q40 435 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 GAD1Q99259 594 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 TUBB1Q9H4B7 451 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 HPS4Q9NQG7 708 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 TTC3P53804 2025 aa14.01□□□□□ -0.17
PCDHB3-201ENST00000231130 KRT87PA6NCN2 255 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms