RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PRCPP42785 496 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 AP2S1P53680 142 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 DPY19L3Q6ZPD9 716 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ARCQ7LC44 396 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 DENND1CQ8IV53 801 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 SIRT2Q8IXJ6 389 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 LGMNQ99538 433 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 APBA2Q99767 749 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ASB7Q9H672 318 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 NDUFA13Q9P0J0 144 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ATXN10Q9UBB4 475 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 C14orf166Q9Y224 244 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 OXTRP30559 389 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 EPHA4P54764 986 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CYP4F2P78329 520 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CYP4F3Q08477 520 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 DYRK1AQ13627 763 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 E2F2Q14209 437 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ZNF730Q6ZMV8 503 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 SLC30A5Q8TAD4 765 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ROPN1BQ9BZX4 212 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 EHD1Q9H4M9 534 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ROPN1Q9HAT0 212 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 FTSJ1Q9UET6 329 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 RAB21Q9UL25 225 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 MRPS7Q9Y2R9 242 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 PPRC1Q5VV67 1664 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 PCSK2P16519 638 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CASP5P51878 434 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 DIO3P55073 304 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 TARBP2Q15633 366 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 AGKQ53H12 422 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 TOR1AIP1Q5JTV8 583 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PPCDCQ96CD2 204 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CCNL2Q96S94 520 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 C6orf62Q9GZU0 229 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 NUP50Q9UKX7 468 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 C2orf71A6NGG8 1288 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ZMPSTE24O75844 475 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 STK17BO94768 372 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 MMP3P08254 477 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 YBX3P16989 372 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-201ENST00000172853 NMT1P30419 496 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 MRPS6P82932 125 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 ZNF211Q13398 564 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 ABRAXAS2Q15018 415 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PDPK2PQ6A1A2 396 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CRTC3Q6UUV7 619 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ZNF571Q7Z3V5 609 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 GOLM1Q8NBJ4 401 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CAMKVQ8NCB2 501 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 RCBTB1Q8NDN9 531 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 OR9K2Q8NGE7 335 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 HELQQ8TDG4 1101 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 SPRYD4Q8WW59 207 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 ZDHHC12Q96GR4 267 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 YIPF4Q9BSR8 244 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PCDHAC2Q9Y5I4 1007 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ELOA3DA6NLF2 546 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 HACD1B0YJ81 288 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CDC7O00311 574 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 AP5Z1O43299 807 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 GDI1P31150 447 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 MAP3K8P41279 467 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ID4P47928 161 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CCNHP51946 323 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 PLA2G4EQ3MJ16 856 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ELOA3BQ3SY89 546 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 C6orf132Q5T0Z8 1188 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 SLC36A4Q6YBV0 504 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ELOA3Q8NG57 546 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CHTF18Q8WVB6 975 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CMKLR1Q99788 373 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 NOL11Q9H8H0 719 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 GDF3Q9NR23 364 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 COG5Q9UP83 839 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PLXNC1O60486 1568 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 FAM86B1E9PN63 330 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 TREHO43280 583 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 BRINP1O60477 761 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 KCNJ13O60928 360 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 KDM4BO94953 1096 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 AGTP01019 485 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PFKMP08237 780 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 FAM86B2P0C5J1 330 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 GNRHRP30968 328 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 TSFMP43897 325 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 NR2C2P49116 596 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 NFIXQ14938 502 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 C2orf76Q3KRA6 126 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CTU1Q7Z7A3 348 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 FAM86B1Q8N7N1 296 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 OR9A4Q8NGU2 314 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ITFG1Q8TB96 612 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ADAM32Q8TC27 787 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CLP1Q92989 425 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 AKT1S1Q96B36 256 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 AARSD1Q9BTE6 412 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 SPATC1LQ9H0A9 340 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 TRIM49BA6NDI0 452 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms