RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 UGT1A1P22309 533 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 UGT1A4P22310 534 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 UGT1A3P35503 534 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 UGT1A5P35504 534 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ATP5C1P36542 298 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 ZNF140P52738 457 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 RPL38P63173 70 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 NFKB2Q00653 900 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 CTBSQ01459 385 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 XKR5Q6UX68 686 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 TMEM26Q6ZUK4 368 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 AQP12AQ8IXF9 295 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 CARNMT1Q8N4J0 409 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 DBF4BQ8NFT6 615 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 RHEBL1Q8TAI7 183 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FAM81AQ8TBF8 368 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 GAB3Q8WWW8 586 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 BIRC8Q96P09 236 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 DERL2Q9GZP9 239 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 EXD2Q9NVH0 621 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ARMC1Q9NVT9 282 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 PCDHA9Q9Y5H5 950 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 A0A087WXM4 84 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 MANSC4A6NHS7 340 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 DRGXA6NNA5 263 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 SYCE1LA8MT33 242 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 K7ERQ8 282 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 RPS17P08708 135 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 HMOX2P30519 316 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 TPD52P55327 224 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 TGFBIQ15582 683 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 AP5B1Q2VPB7 878 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PTRHD1Q6GMV3 140 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 HACD2Q6Y1H2 254 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 Q6ZSR9 355 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 SGCDQ92629 289 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 C12orf43Q96C57 262 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ZNF599Q96NL3 588 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ASB2Q96Q27 587 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PSKH2Q96QS6 385 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 BOCQ9BWV1 1114 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 NLE1Q9NVX2 485 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 LEF1Q9UJU2 399 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 SLC8A2Q9UPR5 921 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 TDRKHQ9Y2W6 561 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 SLC30A1Q9Y6M5 507 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 HSD17B1P14061 328 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ELK4P28324 431 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 CORO1AP31146 461 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 OR1D2P34982 312 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 RPS9P46781 194 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 SLC11A1P49279 550 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ADARP55265 1226 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 CAP1Q01518 475 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PRKG2Q13237 762 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 DCTN2Q13561 401 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 PABPC1LQ4VXU2 614 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 RFTN2Q52LD8 501 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 LCN8Q6JVE9 175 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 SFRP1Q8N474 314 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 FAM86B1Q8N7N1 296 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PROKR1Q8TCW9 393 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 C17orf80Q9BSJ5 609 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 TDRD1Q9BXT4 1180 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 ING2Q9H160 280 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 CXorf21Q9HAI6 301 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ABCD2Q9UBJ2 740 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ANGPTL3Q9Y5C1 460 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 KLHL33A6NCF5 533 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 CAPNS1P04632 268 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 SLC11A2P49281 568 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ATP4BP51164 291 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 IL1RL1Q01638 556 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ACVR1Q04771 509 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 BNIP2Q12982 314 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 CTSL3PQ5NE16 218 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PRMT9Q6P2P2 845 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 CD200R1Q8TD46 325 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 SKA2Q8WVK7 121 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 UHRF1Q96T88 793 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 FARSBQ9NSD9 589 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 U3KQV3 271 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ANKRD66B4E2M5 251 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 DFNA5O60443 496 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 RSL1D1O76021 490 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 ALDH2P05091 517 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 GSNP06396 782 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 UROSP10746 265 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 RFC2P35250 354 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 CCT8P50990 548 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PIGFQ07326 219 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PMS2P3Q13401 168 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 RCAN2Q14206 197 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 IMPG1Q17R60 797 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 MBOAT1Q6ZNC8 495 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms