RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 LrgukQ9D5S7 820 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 H2-OaQ9QWV1 250 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Psma4Q9R1P0 261 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rasal1Q9Z268 799 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 TicrrQ8BQ33 1889 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tmem201A2A8U2 664 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 FgaE9PV24 789 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r120E9PX34 856 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm37240E9QAY5 252 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm8879F6R3J9 157 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Arfip1G5E8V9 373 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Bcat1P24288 386 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Kcnab3P97382 249 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Psmb4P99026 264 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tex261Q62302 196 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tmem151aQ6GQT5 468 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 AtminQ6P9S1 818 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 1700001J03RikQ80ZR8 219 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Guf1Q8C3X4 651 aaKnown RBP9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rdh10Q8VCH7 341 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr444Q8VFS6 310 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Riok2Q9CQS5 547 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ogfod3Q9D136 315 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 2010109A12RikQ9D875 119 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 GmprQ9DCZ1 345 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Xlr4bQ9JJQ7 215 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Cd300ld4A2A7W1 245 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 4930595M18RikA2RRY9 829 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr726E9Q8X3 321 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn1r12G5E8G1 307 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Angpt1O08538 498 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 H2-Q1O19441 368 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 H2-Q7P14429 334 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 H2-Q8P14430 326 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cd68P31996 326 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bdkrb2P32299 392 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 FshrP35378 692 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 H2-Q6P79568 326 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Malt1Q2TBA3 832 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lpcat1Q3TFD2 534 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mettl17Q3U2U7 461 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fgfr3Q61851 801 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 BegainQ68EF6 600 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tlr12Q6QNU9 906 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cd300ld3Q6SJQ5 245 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Paqr6Q6TCG5 343 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ChfrQ810L3 664 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lrrtm2Q8BGA3 515 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rcn3Q8BH97 328 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Yipf6Q8BR70 236 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 GmppbQ8BTZ7 360 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Usp43Q8BUM9 1132 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zfp62Q8C827 914 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gsdmc3Q8CB12 480 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zfpm2Q8CCH7 1151 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bclaf1Q8K019 919 aaKnown RBP9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Utp4Q8R2N2 686 aaKnown RBP9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc25a38Q91XD8 326 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mrps18bQ99N84 254 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Chit1Q9D7Q1 464 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Il1rl2Q9ERS7 574 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Prss16Q9QXE5 509 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ltn1Q6A009 1767 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc37a4A0A1L1SUI3 450 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ankrd63A2ARS0 390 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tnfrsf25B1AWN9 411 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm5930D3Z257 264 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Il20rbE9Q9A6 308 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kcng2F7A6P6 480 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn2r75G5E8Z7 853 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm3755K7N743 167 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn2r31L7N1Z4 861 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm3033M0QWI0 180 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm3532M0QWL4 194 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 MgllO35678 303 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Dsg3O35902 993 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ctla2aP12399 137 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cyp11b2P15539 500 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rad54lP70270 747 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Serpinf1P97298 417 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ncf4P97369 339 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 1700057G04RikQ3V0U0 232 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rassf5Q5EBH1 413 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Wbp4Q61048 376 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Foxj1Q61660 421 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ManealQ6P1J0 452 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 SepsecsQ6P6M7 504 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fam126aQ6P9N1 521 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cdh24Q6PFX6 781 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Sytl5Q80T23 753 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vangl1Q80Z96 526 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zfp189Q8BKP2 608 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rgs7bpQ8BQP9 257 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Trub1Q8C0D0 338 aaKnown RBP9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpr157Q8C206 330 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Apoa5Q8C7G5 368 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Smco1Q8CEZ1 214 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Adprhl2Q8CG72 370 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tspan10Q8VCF5 331 aa9.64□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr821Q8VG45 310 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms