RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 SncgQ9Z0F7 123 aaKnown RBP10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm6337K7N6X9 211 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm3115L7N285 211 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Fam71e2L7N480 754 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Kcnn4O89109 425 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 StimateQ3UF25 288 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Txndc15Q6P6J9 344 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Q810N5 247 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pan2Q8BGF7 1200 aaKnown RBP10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Elmo3Q8BYZ7 720 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 BpifcQ8C186 509 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cers2Q924Z4 380 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PdgfdQ925I7 370 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gemin2Q9CQQ4 269 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Arl10Q9QXJ4 243 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dgat1Q9Z2A7 498 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Armc4B2RY50 1037 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm3383J3QQ59 259 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PdgfrbP05622 1098 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 TP20293 436 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pld5Q3UNN8 536 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm8773Q3UQ24 132 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Avl9Q80U56 649 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gemin8Q8BHE1 238 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tprg1Q8CB49 279 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cd300ldQ8VCH2 221 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dus2Q9D7B1 493 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cyp3a41aQ9JMA7 504 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 UxtQ9WTZ0 157 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Nup188Q6ZQH8 1759 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Kctd18E0CZ26 429 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Vcam1P29533 739 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 CenpcP49452 906 aaKnown RBP10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 MafbP54841 323 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pdcd5P56812 126 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Foxd1Q61345 456 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PeloQ80X73 385 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Slc15a4Q91W98 574 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 LsrQ99KG5 594 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Actl7bQ9QY83 418 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PurbO35295 324 aaKnown RBP10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 MndaP0DOV1 425 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PdgfrlQ6PE55 375 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pcdh20Q8BIZ0 952 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dppa4Q8CCG4 296 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Spin4Q8K1L2 249 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Exosc4Q921I9 245 aaKnown RBP10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ranbp3Q9CT10 491 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ttc25Q9D4B2 624 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ptges3lQ9D9A7 131 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm6509A0A0J9YUV1 481 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Vmn2r19G5E8G4 854 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm6351K9J7D1 481 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Psmc3ipO35047 217 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cbfa2t3O54972 620 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mkln1O89050 735 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 LvrnQ2KHK3 559 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Trmt6Q8CE96 497 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 4930550L24RikQ99PA7 320 aa10.37□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ptpn3A2ALK8 913 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Otud3B1AZ99 396 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mapk10Q61831 464 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cspg5Q71M36 566 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Fbxo30Q8BJL1 746 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tyw3Q8BSA9 257 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Rgs8Q8BXT1 180 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Wdr59Q8C0M0 992 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 St8sia6Q8K4T1 398 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mtif3Q9CZD5 276 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Trmt1lA2RSY6 728 aaKnown RBP10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Msl3l2G3X992 371 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ifnar2O35664 513 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mup3P04939 184 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Npy2rP97295 381 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Kctd4Q9D7X1 259 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr742A2RTP5 311 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Atp6ap1lD3Z5W0 336 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Lhx1P63006 406 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr681Q3SXH8 315 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pdcd4Q61823 469 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dpp10Q6NXK7 797 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Adam29Q811Q4 763 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Il36gQ8R460 164 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr1502Q8VG66 316 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr679Q8VGV0 315 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Vmn1r39G3UWE6 305 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 MaffO54791 156 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Slc28a2O88627 660 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Sh3pxd2aO89032 1124 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Zmat1Q3V0C1 714 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr813Q7TRH5 310 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gtf2a2Q80ZM7 109 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Sema3dQ8BH34 777 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm21973F6WEZ7 68 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 GscQ02591 256 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Papss1Q60967 624 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Znf512Q69Z99 562 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Zswim5Q80TC6 1188 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Spp2Q8K1I3 203 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gstm1P10649 218 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms