RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Cxcr1Q810W6 351 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Znf784Q8BI69 297 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 OsgepQ8BWU5 335 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zbtb8bQ8CII0 484 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr273Q8VG87 317 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cpxm2Q9D2L5 764 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Sh2d4aQ9D7V1 421 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc29a1Q9JIM1 460 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cdh22Q9WTP5 813 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tle2Q9WVB2 767 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zfp472B0V2W5 534 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm10477F6SW83 55 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pabpc4lG5E8X2 370 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 P01631 113 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fv4P11370 679 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Aff3P51827 1254 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Neurog1P70660 244 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bop1P97452 732 aaKnown RBP8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fam35aQ3UEN2 891 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zmpste24Q80W54 475 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vps26bQ8C0E2 336 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ttc23Q8CHY7 488 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Akr1c20Q8VC77 323 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 L2hgdhQ91YP0 464 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mat2bQ99LB6 334 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Stx11Q9D3G5 287 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 PacrglQ9D3X5 248 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 P33monoxQ9DBN4 303 aa8.4□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 4933424G06RikA0A140LIP3 267 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Vmn2r14E9Q759 848 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ebf3O08791 596 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gp1baO35930 734 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Cxcr2P35343 359 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 St14P56677 855 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Cct7P80313 544 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Znf800Q0VEE6 662 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Coq10bQ3THF9 240 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Scrn3Q3TMH2 418 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Lrrc47Q505F5 581 aaKnown RBP8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tigd3Q7TM95 470 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gpr142Q7TQN9 365 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Olfr792Q7TRH9 311 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gm6377Q8BHV4 303 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Fam221bQ8C627 487 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Adgrg1Q8K209 687 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Irak4Q8R4K2 459 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Adgrf1Q8VEC3 908 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 AslQ91YI0 464 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Carm1Q9WVG6 608 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Igkv5-45A0A0B4J1J1 115 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 A530032D15RikE9Q422 215 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gnpda1O88958 289 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Yme1l1O88967 715 aaKnown RBP8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ifngr1P15261 477 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Svs4P18419 113 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 CskP41241 450 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 PrkcgP63318 697 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pfkfb2P70265 519 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 CilpQ66K08 1184 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Serpina3aQ6P4P1 422 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Nlrp10Q8CCN1 673 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Exd1Q8CDF7 570 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 DolkQ8R2Y3 534 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Agr3Q8R3W7 165 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 DcxrQ91X52 244 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Nipa2Q9JJC8 359 aa8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Bag6Q9Z1R2 1154 aaKnown RBP8.4□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 A0A286YCD0 109 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Nhsl2B1AXH1 854 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ccdc149F6V035 524 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 ClockO08785 855 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Psma3O70435 255 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Hcn3O88705 779 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 P01644 108 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 P01645 108 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 P01646 108 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 P01647 108 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 RapsnP12672 412 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Apobec1P51908 229 aaKnown RBP8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Cpne9Q1RLL3 553 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Naa11Q3UX61 218 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pacs2Q3V3Q7 862 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gpr19Q61121 415 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 TCAIMQ66JZ4 499 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Shkbp1Q6P7W2 704 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 4930503B20RikQ80ZP0 234 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Q810N5 247 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Stk32aQ8BGW6 398 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tyw3Q8BSA9 257 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ttc34Q8C0Q3 554 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pcyox1lQ8C7K6 495 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Art3Q8R2G4 371 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Zfp940Q8R2Q3 566 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pcdhb3Q91XZ7 784 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gins4Q99LZ3 223 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tor1bQ9ER41 336 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gm28363A0A087WQW2 129 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 E030030I06RikJ3QML9 246 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 AprtP08030 180 aa8.39□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 E2f2P56931 443 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms