RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Mrps2Q924T2 291 aaKnown RBP12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Arl2Q9D0J4 184 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ift27Q9D0P8 186 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Stx11Q9D3G5 287 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ribc2Q9D4Q1 309 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Atad1Q9D5T0 361 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gpc6Q9R087 555 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 4933424G06RikA0A140LIP3 267 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm7073E9QAS1 335 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fbxw9F8VPX2 458 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm21897J3KMP5 500 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm21750L7N228 499 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Hcn1O88704 910 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tap1P21958 724 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gpr149Q3UVY1 732 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Clca4bQ3UW98 925 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ipcef1Q5DU31 406 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ckmt2Q6P8J7 419 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Smarcal1Q8BJL0 910 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Dcun1d5Q9CXV9 237 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Duoxa2Q9D311 320 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fundc2Q9D6K8 151 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Usp51B1AY15 661 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm3755K7N743 167 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Trdmt1O55055 415 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Arl6O88848 186 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Naa11Q3UX61 218 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cyp4f37Q3V1F1 546 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tp53i13Q5F267 385 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc5a10Q5SWY8 596 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr814Q7TRH4 310 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vrk2Q8BN21 503 aaKnown RBP12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Znf668Q8K2R5 619 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Swi5Q8K3D3 89 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc29a4Q8R139 528 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Il36gQ8R460 164 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vps4aQ8VEJ9 437 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rnf144aQ925F3 292 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc24a3Q99PD7 645 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rgs18Q99PG4 235 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ppp6cQ9CQR6 305 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tmem53Q9D0Z3 276 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Exoc2Q9D4H1 924 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fabp12Q9DAK4 132 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 AcadsbQ9DBL1 432 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Bcorl1A2AQH4 1781 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 6720489N17RikA0A1Y7VJW0 127 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fam181aJ3QNB7 292 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vmn2r46L7N282 809 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Il1aP01582 270 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Impdh1P50096 514 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Irf6P97431 467 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 IdsQ08890 552 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cyp2c65Q148B1 490 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Hp1bp3Q3TEA8 554 aaKnown RBP12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gpr174Q3U507 335 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Dsg1bQ7TSF1 1060 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Coq9Q8K1Z0 313 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc8a2Q8K596 921 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Hid1Q8R1F6 788 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gimap3Q99MI6 301 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Lrrc18Q9CQ07 262 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 NwcQ9CQI4 244 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 NplQ9DCJ9 320 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Prrg1A2BFE8 218 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr564E9PWA8 316 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Aldh2P47738 519 aaKnown RBP12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vbp1P61759 196 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 H2-M3Q31093 336 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cyb5r2Q3KNK3 276 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ap5b1Q3TAP4 876 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 P2rx3Q3UR32 397 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Zrsr1Q64707 428 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 DgkbQ6NS52 802 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ckap4Q8BMK4 575 aaKnown RBP12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Guf1Q8C3X4 651 aaKnown RBP12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc46a2Q8CA03 479 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ca9Q8VHB5 437 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Idh3bQ91VA7 384 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Atg7Q9D906 698 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Psme4Q5SSW2 1843 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Znf318Q99PP2 2237 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr1200A2ATJ4 336 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vmn2r24D3YUI0 854 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Hsd17b10O08756 261 aaKnown RBP12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 PenkP22005 268 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Copz1P61924 177 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 AnpepP97449 966 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Eif2b4Q61749 524 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Klhl23Q6GQU2 558 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Q6P2K3 674 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr1105Q7TR58 312 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Phf11aQ8BVM9 293 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Clec1aQ8BWY2 269 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fam110bQ8C739 366 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 St7lQ8K4P7 559 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Nprl3Q8VIJ8 569 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Zfp617Q91WM0 559 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pcdhb6Q91XZ4 772 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Klk6Q91Y82 253 aa12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms