RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Yy2Q3TTC2 378 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Pnpla1Q3V1D5 599 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 D3Ertd751eQ8BGN2 192 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Znf784Q8BI69 297 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Prdm8Q8BZ97 687 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Vmn1r198Q8R263 300 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Clstn3Q99JH7 956 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Znf639Q99KZ6 485 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Scd3Q99PL7 359 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slco1c1Q9ERB5 715 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Smad9Q9JIW5 430 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Prokr1Q9JKL1 393 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rgs20Q9QZB1 239 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 TriobpQ99KW3 2014 aa18.56■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Speer4cG3UXD1 256 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Gm10354K7N6A0 256 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Anxa6P14824 673 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Stt3aP46978 705 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Naa20P61600 178 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Akr1c6P70694 323 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Patl1Q3TC46 770 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rbbp7Q60973 425 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rps9Q6ZWN5 194 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slc39a4Q78IQ7 660 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 C2cd4bQ80XU5 340 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Bclaf1Q8K019 919 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Snrnp27Q8K194 155 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Mcoln3Q8R4F0 553 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slc44a3Q921V7 656 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Nrif1Q923B3 828 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Fgf22Q9ESS2 162 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slc2a5Q9WV38 501 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Adamts9E9PUN6 1931 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Herc6F2Z461 1003 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 RfngO09009 332 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Eci1P42125 289 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 WasP70315 520 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cntnap5bQ0V8T8 1292 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Gm5800Q497L3 186 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Dusp11Q6NXK5 321 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Teddm1aQ810U2 305 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Samd3Q8C4H2 520 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Znf622Q91VY9 476 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Shmt2Q9CZN7 504 aaKnown RBP18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Nudt14Q9D142 222 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Q9D3J9 298 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Dnajb4Q9D832 337 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Nectin1Q9JKF6 515 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 SqorQ9R112 450 aa18.55■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 L3mbtl1A2A5N8 826 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Itga8A2ARA8 1062 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 E2f3O35261 457 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Hmga1P17095 107 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 PthlhP22858 175 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Smpdl3aP70158 445 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Inf2Q0GNC1 1273 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Ddx51Q6P9R1 639 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rexo4Q6PAQ4 432 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cyp2r1Q6VVW9 501 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Olfr366Q7TRY4 309 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Fam72aQ8BFZ8 149 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Psd4Q8BLR5 1005 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cdh7Q8BM92 785 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rbms3Q8BWL5 431 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Capn8Q91VA3 703 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Katna1Q9WV86 491 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Mad2l1Q9Z1B5 205 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Numa1E9Q7G0 2094 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Capn5O08688 640 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Man2b1O09159 1013 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Gna12P27600 379 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Etv2P41163 335 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 InhbcP55104 352 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Syt12Q920N7 421 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 PrkxQ922R0 355 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 NtpcrQ9CQA9 190 aaKnown RBP18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Ribc2Q9D4Q1 309 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cmtm7Q9ESD6 167 aa18.54■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Vmn2r-ps130A0A140T8U3 855 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 1700011I03RikE9PYL8 271 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Gm8011K7N6Y5 207 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Ap3d1O54774 1199 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Kpna1Q60960 538 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Krt75Q8BGZ7 551 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Ifi44Q8BV66 422 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Q8BWQ6 963 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cant1Q8VCF1 403 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Epm2aip1Q8VEH5 606 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Olfr1311Q8VET0 312 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Olfr371Q8VGB8 312 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slc35a5Q921R7 437 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Mrpl1Q99N96 336 aaKnown RBP18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 H2bfmQ9DAB5 224 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Pidd1Q9ERV7 915 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 IkbkeQ9R0T8 717 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Sae1Q9R1T2 350 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Veph1A1A535 833 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Fam131cA2ADB2 273 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Gm6685D3YYP3 228 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slc4a5E9Q3M5 1116 aa18.53■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms