RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 OLFM1Q99784 485 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 MYOCQ99972 504 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 TMEM63AO94886 807 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 IRF5Q13568 498 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 PDK3Q15120 406 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 ARMC4Q5T2S8 1044 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 NAIF1Q69YI7 327 aaPredicted RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 FSTL5Q8N475 847 aaPredicted RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 SH3RF2Q8TEC5 729 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 SLC47A1Q96FL8 570 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 NPAS2Q99743 824 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 AHDC1Q5TGY3 1603 aaPredicted RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 HOXD13P35453 343 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 ANGPT1Q15389 498 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 FBXL22Q6P050 247 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 FAM92BQ6ZTR7 304 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 LDB1Q86U70 411 aaPredicted RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 GPR135Q8IZ08 494 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 PQLC1Q8N2U9 271 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 TSPAN14Q8NG11 270 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 ROPN1LQ96C74 230 aa13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 MRPS26Q9BYN8 205 aaKnown RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 PAPOLBQ9NRJ5 636 aaKnown RBP13.34□□□□□ -0.27
PTPRVP-205ENST00000641549 PHRF1Q9P1Y6 1649 aaKnown RBP13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SLC28A2O43868 658 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 DNAJB1P25685 340 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 NOVP48745 357 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 TAS2R39P59534 338 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 RIPK1Q13546 671 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 TRIQKQ629K1 86 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 MAMDC4Q6UXC1 1216 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 DLK2Q6UY11 383 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 GK5Q6ZS86 529 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 ABCB8Q9NUT2 735 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 PIRO00625 290 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 HSPA7P48741 367 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SLC18A1P54219 525 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SPIBQ01892 262 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 PDZK1Q5T2W1 519 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.33□□□□□ -0.284e-6■■■■■ 60.5
PTPRVP-205ENST00000641549 CFAP206Q8IYR0 622 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 GLB1L3Q8NCI6 653 aaPredicted RBP13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 DNAJB8Q8NHS0 232 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 OVCA2Q8WZ82 227 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 NEK6Q9HC98 313 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 PCDHGA11Q9Y5H2 935 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 HEBP2Q9Y5Z4 205 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 EDNRBP24530 442 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 TPP2P29144 1249 aaPredicted RBP13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 HSD17B2P37059 387 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 USP46P62068 366 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 CYP4F8P98187 520 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 PTSQ03393 145 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 NR1D2Q14995 579 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 IL23RQ5VWK5 629 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 ING5Q8WYH8 240 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 LPIN3Q9BQK8 851 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 RAB11FIP5Q9BXF6 653 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 CSKP41240 450 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 SLC1A2P43004 574 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 MTAPQ13126 283 aa13.33□□□□□ -0.28
PTPRVP-205ENST00000641549 BUD31P41223 144 aaPredicted RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 POLR3BQ9NW08 1133 aaPredicted RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 IRGMA1A4Y4 181 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 CCDC85CA6NKD9 419 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 PPEF2O14830 753 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 OR10H3O60404 316 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 ZNF24P17028 368 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 C9orf64Q5T6V5 341 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 UNC5BQ8IZJ1 945 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 NPY6RQ99463 290 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 WRAP53Q9BUR4 548 aaKnown RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 RETREG1Q9H6L5 497 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 PI15O43692 258 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 PCCBP05166 539 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 ANXA4P09525 319 aaPredicted RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 CCL5P13501 91 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 RPL5P46777 297 aaKnown RBP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 ECT2LQ008S8 904 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 CHIT1Q13231 466 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 DENND6AQ8IWF6 608 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 BPIFB6Q8NFQ5 453 aa13.32□□□□□ -0.28
PTPRVP-205ENST00000641549 OR2T34Q8NGX1 318 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms